RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 GAGE12FP0CL80 117 aa13.75□□□□□ -0.21
LIMS2-212ENST00000466410 GAGE12GP0CL81 117 aa13.75□□□□□ -0.21
LIMS2-212ENST00000466410 GAGE12IP0CL82 117 aa13.75□□□□□ -0.21
LIMS2-212ENST00000466410 RPL35AP18077 110 aaKnown RBP13.75□□□□□ -0.21
LIMS2-212ENST00000466410 LOC100131303A0A0U1RQF7 123 aa13.75□□□□□ -0.21
LIMS2-212ENST00000466410 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
LIMS2-212ENST00000466410 F5H768 121 aa13.74□□□□□ -0.21
LIMS2-212ENST00000466410 GCN1Q92616 2671 aaKnown RBP13.74□□□□□ -0.21
LIMS2-212ENST00000466410 J3QKU1 62 aa13.74□□□□□ -0.21
LIMS2-212ENST00000466410 TRGV2A0A075B6R0 118 aa13.73□□□□□ -0.21
LIMS2-212ENST00000466410 LST1O00453 97 aa13.73□□□□□ -0.21
LIMS2-212ENST00000466410 SOSTDC1Q6X4U4 206 aa13.73□□□□□ -0.21
LIMS2-212ENST00000466410 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
LIMS2-212ENST00000466410 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
LIMS2-212ENST00000466410 C19orf73Q9NVV2 129 aa13.72□□□□□ -0.21
LIMS2-212ENST00000466410 C16orf74Q96GX8 76 aa13.72□□□□□ -0.21
LIMS2-212ENST00000466410 UBE2WQ96B02 151 aa13.71□□□□□ -0.21
LIMS2-212ENST00000466410 UBE2L6O14933 153 aa13.71□□□□□ -0.22
LIMS2-212ENST00000466410 KRTAP1-1Q07627 177 aa13.71□□□□□ -0.22
LIMS2-212ENST00000466410 MEIG1Q5JSS6 88 aa13.7□□□□□ -0.22
LIMS2-212ENST00000466410 IGLV1-51P01701 117 aa13.7□□□□□ -0.22
LIMS2-212ENST00000466410 FASNP49327 2511 aaKnown RBP13.69□□□□□ -0.22
LIMS2-212ENST00000466410 H3BT86 120 aa13.69□□□□□ -0.22
LIMS2-212ENST00000466410 CMC4P56277 68 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-212ENST00000466410 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
LIMS2-212ENST00000466410 ANK3Q12955 4377 aaKnown RBP13.69□□□□□ -0.22
LIMS2-212ENST00000466410 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
LIMS2-212ENST00000466410 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
LIMS2-212ENST00000466410 RNASE1P07998 156 aaKnown RBP13.67□□□□□ -0.22
LIMS2-212ENST00000466410 HECTD1Q9ULT8 2610 aa13.67□□□□□ -0.22
LIMS2-212ENST00000466410 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
LIMS2-212ENST00000466410 TRGV4A0A0C4DH28 118 aa13.66□□□□□ -0.22
LIMS2-212ENST00000466410 OVOL2Q9BRP0 275 aa13.66□□□□□ -0.22
LIMS2-212ENST00000466410 CITED1Q99966 193 aa13.66□□□□□ -0.22
LIMS2-212ENST00000466410 GAGE6Q13070 117 aa13.65□□□□□ -0.22
LIMS2-212ENST00000466410 FAM110AQ9BQ89 295 aa13.65□□□□□ -0.22
LIMS2-212ENST00000466410 HERV-K104P63124 156 aa13.65□□□□□ -0.22
LIMS2-212ENST00000466410 IGKV3OR2-268A0A0C4DH90 116 aa13.64□□□□□ -0.23
LIMS2-212ENST00000466410 CRLF1O75462 422 aa13.64□□□□□ -0.23
LIMS2-212ENST00000466410 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
LIMS2-212ENST00000466410 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
LIMS2-212ENST00000466410 IGLV4-60A0A075B6I1 120 aa13.63□□□□□ -0.23
LIMS2-212ENST00000466410 FHL2Q14192 279 aa13.63□□□□□ -0.23
LIMS2-212ENST00000466410 COX7A2LO14548 114 aa13.62□□□□□ -0.23
LIMS2-212ENST00000466410 FN1P02751 2386 aaKnown RBP13.62□□□□□ -0.23
LIMS2-212ENST00000466410 SNCGO76070 127 aa13.61□□□□□ -0.23
LIMS2-212ENST00000466410 TRBV6-8A0A0A6YYG3 113 aa13.6□□□□□ -0.23
LIMS2-212ENST00000466410 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
LIMS2-212ENST00000466410 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
LIMS2-212ENST00000466410 CHCHD5Q9BSY4 110 aa13.59□□□□□ -0.23
LIMS2-212ENST00000466410 DEFB121Q5J5C9 76 aa13.58□□□□□ -0.24
LIMS2-212ENST00000466410 C15orf53Q8NAA6 179 aa13.58□□□□□ -0.24
LIMS2-212ENST00000466410 MIR7-3HGQ8N6C7 128 aa13.57□□□□□ -0.24
LIMS2-212ENST00000466410 GAGE2BQ13066 116 aa13.57□□□□□ -0.24
LIMS2-212ENST00000466410 GAGE2EQ4V326 116 aa13.57□□□□□ -0.24
LIMS2-212ENST00000466410 GAGE2DQ9UEU5 116 aa13.57□□□□□ -0.24
LIMS2-212ENST00000466410 TRAV26-1A0A087WT03 109 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 IGHV3OR16-9A0A0B4J2B5 98 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 DEFB130BP0DP73 79 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 DEFB130AP0DP74 79 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 SMR3AQ99954 134 aa13.56□□□□□ -0.24
LIMS2-212ENST00000466410 ANAPC13Q9BS18 74 aa13.55□□□□□ -0.24
LIMS2-212ENST00000466410 PPDPFQ9H3Y8 114 aa13.55□□□□□ -0.24
LIMS2-212ENST00000466410 FAM218AQ96MZ4 157 aa13.54□□□□□ -0.24
LIMS2-212ENST00000466410 HILS1P60008 231 aa13.54□□□□□ -0.24
LIMS2-212ENST00000466410 C5orf38Q86SI9 138 aa13.53□□□□□ -0.24
LIMS2-212ENST00000466410 NBEAL2Q6ZNJ1 2754 aa13.53□□□□□ -0.24
LIMS2-212ENST00000466410 TTC32Q5I0X7 151 aa13.53□□□□□ -0.24
LIMS2-212ENST00000466410 LINC00337Q8N6G1 96 aa13.53□□□□□ -0.24
LIMS2-212ENST00000466410 IGKV2-28A0A075B6P5 120 aa13.52□□□□□ -0.24
LIMS2-212ENST00000466410 IGKV2D-28P01615 120 aa13.52□□□□□ -0.24
LIMS2-212ENST00000466410 FAM240AA0A1B0GVK7 77 aa13.52□□□□□ -0.25
LIMS2-212ENST00000466410 LINC00158P58513 81 aa13.52□□□□□ -0.25
LIMS2-212ENST00000466410 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.25
LIMS2-212ENST00000466410 TRACP01848 142 aa13.51□□□□□ -0.25
LIMS2-212ENST00000466410 KRTAP10-3P60369 221 aa13.51□□□□□ -0.25
LIMS2-212ENST00000466410 A0A087WZ39 114 aa13.51□□□□□ -0.25
LIMS2-212ENST00000466410 TRAV13-2A0A0B4J235 113 aa13.51□□□□□ -0.25
LIMS2-212ENST00000466410 OTOGQ6ZRI0 2925 aa13.5□□□□□ -0.25
LIMS2-212ENST00000466410 CRPP02741 224 aa13.5□□□□□ -0.25
LIMS2-212ENST00000466410 NHLRC4P0CG21 123 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-212ENST00000466410 HIVEP2P31629 2446 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 LINC00959A0A1B0GUT2 108 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 PF4P02776 101 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 BAALC-AS2P0C853 105 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 GYPEP15421 78 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 RPL28P46779 137 aaKnown RBP13.49□□□□□ -0.25
LIMS2-212ENST00000466410 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
LIMS2-212ENST00000466410 CCL18P55774 89 aa13.48□□□□□ -0.25
LIMS2-212ENST00000466410 NDUFV3P56181 108 aaKnown RBP13.48□□□□□ -0.25
LIMS2-212ENST00000466410 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
LIMS2-212ENST00000466410 Q6Q795 121 aa13.48□□□□□ -0.25
LIMS2-212ENST00000466410 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
LIMS2-212ENST00000466410 PFN2P35080 140 aa13.47□□□□□ -0.25
LIMS2-212ENST00000466410 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
LIMS2-212ENST00000466410 VWFP04275 2813 aa13.46□□□□□ -0.25
LIMS2-212ENST00000466410 IBA57-AS1B1ANH7 110 aa13.46□□□□□ -0.26
LIMS2-212ENST00000466410 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.26
LIMS2-212ENST00000466410 C11orf68Q9H3H3 251 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms