RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 SNHG12Q9BXW3 62 aa1.38□□□□□ -2.19
CCT4-203ENST00000461540 SCP2D1Q9UJQ7 156 aa1.38□□□□□ -2.19
CCT4-203ENST00000461540 BRCA2P51587 3418 aa1.38□□□□□ -2.19
CCT4-203ENST00000461540 PATJQ8NI35 1801 aa1.38□□□□□ -2.19
CCT4-203ENST00000461540 NCOR1O75376 2440 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 TRBV30A0A0K0K1B3 111 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 NAP1L6A6NFF2 107 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 CCL3L1P16619 93 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 V9GYV3 84 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 TSC2P49815 1807 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 EML5Q05BV3 1969 aa1.37□□□□□ -2.19
CCT4-203ENST00000461540 REV3LO60673 3130 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 GNGT2O14610 69 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 CR1P17927 2039 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 KLKP1Q107X0 134 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 VAMP8Q9BV40 100 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 PRO3102Q9H379 93 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 CENPFP49454 3210 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 TRANK1O15050 2925 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 BDP1A6H8Y1 2624 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 SZT2Q5T011 3432 aa1.36□□□□□ -2.19
CCT4-203ENST00000461540 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 PTPRDP23468 1912 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 PVALEFA0A1B0GWK0 134 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 EDDM3BP56851 147 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 ELOF1P60002 83 aaKnown RBP1.35□□□□□ -2.19
CCT4-203ENST00000461540 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 LINC00474Q9P2X8 69 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 V9GYS6 101 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 TTC28Q96AY4 2481 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 TNRC6BQ9UPQ9 1833 aaKnown RBP1.35□□□□□ -2.19
CCT4-203ENST00000461540 CHD9Q3L8U1 2897 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 RANBP2P49792 3224 aaKnown RBP1.35□□□□□ -2.19
CCT4-203ENST00000461540 BAHCC1Q9P281 2608 aa1.35□□□□□ -2.19
CCT4-203ENST00000461540 PRRC2BQ5JSZ5 2229 aaKnown RBP1.34□□□□□ -2.19
CCT4-203ENST00000461540 UNC13CQ8NB66 2214 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 TRBV7-3A0A075B6L6 115 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.19
CCT4-203ENST00000461540 MT-ATP8P03928 68 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 EFNA4P52798 201 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 MGST2Q99735 147 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 TMEM14BQ9NUH8 114 aa1.34□□□□□ -2.19
CCT4-203ENST00000461540 MKI67P46013 3256 aaKnown RBP1.34□□□□□ -2.2
CCT4-203ENST00000461540 TCHHQ07283 1943 aa1.34□□□□□ -2.2
CCT4-203ENST00000461540 MYO7AQ13402 2215 aa1.34□□□□□ -2.2
CCT4-203ENST00000461540 CITO14578 2027 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 PLXNA2O75051 1894 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 SPTBN5Q9NRC6 3674 aaKnown RBP1.33□□□□□ -2.2
CCT4-203ENST00000461540 MUC6Q6W4X9 2439 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 CRYM-AS1A6NIL9 109 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 PPP1R17O96001 155 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 TSLPQ969D9 159 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 PMCHL2Q9BQD1 86 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 DYNLRB1Q9NP97 96 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 MANBALQ9NQG1 85 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 UQCR10Q9UDW1 63 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 LENEPQ9Y5L5 61 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 R4GMQ9 66 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 CACNA1GO43497 2377 aa1.33□□□□□ -2.2
CCT4-203ENST00000461540 TECTAO75443 2155 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 ARFGEF3Q5TH69 2177 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 TNRC6AQ8NDV7 1962 aaKnown RBP1.32□□□□□ -2.2
CCT4-203ENST00000461540 LAMA3Q16787 3333 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 CDH23Q9H251 3354 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 MUC22E2RYF6 1773 aaPredicted RBP1.32□□□□□ -2.2
CCT4-203ENST00000461540 LOC285095A0A1B0GVY8 99 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 hADV29S1A0JD25 119 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 CLPSL1A2RUU4 121 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 LYNX1P0DP58 116 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 SEC11AP67812 179 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 SPAG11BQ08648 103 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 SPAG11AQ6PDA7 123 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 CHD7Q9P2D1 2997 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 PRUNE2Q8WUY3 3088 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 EXPH5Q8NEV8 1989 aa1.32□□□□□ -2.2
CCT4-203ENST00000461540 NINQ8N4C6 2090 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 SPAG17Q6Q759 2223 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
CCT4-203ENST00000461540 SPINK13Q1W4C9 94 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 CHD3Q12873 2000 aaKnown RBP1.31□□□□□ -2.2
CCT4-203ENST00000461540 PLIN4Q96Q06 1357 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 KMT2BQ9UMN6 2715 aaPredicted RBP1.31□□□□□ -2.2
CCT4-203ENST00000461540 COL6A3P12111 3177 aa1.31□□□□□ -2.2
CCT4-203ENST00000461540 MYO18AQ92614 2054 aaKnown RBP1.3□□□□□ -2.2
CCT4-203ENST00000461540 LAMA2P24043 3122 aaKnown RBP1.3□□□□□ -2.2
CCT4-203ENST00000461540 EYSQ5T1H1 3165 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 ATOX1O00244 68 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 NDUFC1O43677 76 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 TRAPPC2P0DI81 140 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 TRAPPC2BP0DI82 140 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 Q0VG73 95 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 Q6ZSA8 131 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 FAM213BQ8TBF2 198 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 FAM167A-AS1Q96KT0 104 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 V9GYH0 126 aa1.3□□□□□ -2.2
CCT4-203ENST00000461540 DNAH12Q6ZR08 3092 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms