RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 F5H768 121 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 COX6A2Q02221 97 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 KPRPQ5T749 579 aaPredicted RBP7.53□□□□□ -1.2
IFT88-204ENST00000461115 Q6ZVH6 145 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 C10orf126Q8N4M7 172 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 LINC00469Q8N7U9 141 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 HIST1H4GQ99525 98 aa7.53□□□□□ -1.2
IFT88-204ENST00000461115 K7EP13 123 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 DEFB4AO15263 64 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 CCL25O15444 150 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 TIMM17BO60830 172 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 IGHV3-30P01768 117 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 SMIM13P0DJ93 91 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 LITAFQ99732 161 aa7.52□□□□□ -1.2
IFT88-204ENST00000461115 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 TRAV8-3A0A0A6YYJ7 113 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 G3V4G9 280 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 GAGE6Q13070 117 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
IFT88-204ENST00000461115 C12orf74Q32Q52 190 aa7.52□□□□□ -1.21
IFT88-204ENST00000461115 NDUFA1O15239 70 aa7.51□□□□□ -1.21
IFT88-204ENST00000461115 CHCHD5Q9BSY4 110 aa7.51□□□□□ -1.21
IFT88-204ENST00000461115 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 SPINK8P0C7L1 97 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 RBX1P62877 108 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
IFT88-204ENST00000461115 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
IFT88-204ENST00000461115 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
IFT88-204ENST00000461115 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
IFT88-204ENST00000461115 A0A087WZ39 114 aa7.48□□□□□ -1.21
IFT88-204ENST00000461115 A0A096LPF7 62 aa7.48□□□□□ -1.21
IFT88-204ENST00000461115 LELP1Q5T871 98 aa7.48□□□□□ -1.21
IFT88-204ENST00000461115 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
IFT88-204ENST00000461115 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
IFT88-204ENST00000461115 ICOSQ9Y6W8 199 aa7.48□□□□□ -1.21
IFT88-204ENST00000461115 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
IFT88-204ENST00000461115 A0A1W2PPM0 123 aa7.47□□□□□ -1.21
IFT88-204ENST00000461115 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
IFT88-204ENST00000461115 IGLL5B9A064 214 aa7.46□□□□□ -1.21
IFT88-204ENST00000461115 RETNQ9HD89 108 aa7.46□□□□□ -1.21
IFT88-204ENST00000461115 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
IFT88-204ENST00000461115 H3BUT2 72 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 K7ERJ3 54 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 IFITM1P13164 125 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 HERV-K104P63124 156 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 VAMP3Q15836 100 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 MIAQ16674 131 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
IFT88-204ENST00000461115 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 K7EP34 96 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 CFC1P0CG37 223 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
IFT88-204ENST00000461115 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 K7EIL1 84 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 SS18Q15532 418 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 LYPD5Q6UWN5 251 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 RAB37Q96AX2 223 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 Q9H8V8 135 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
IFT88-204ENST00000461115 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
IFT88-204ENST00000461115 A4D1N5 150 aa7.43□□□□□ -1.22
IFT88-204ENST00000461115 FABP2P12104 132 aa7.43□□□□□ -1.22
IFT88-204ENST00000461115 Q6ZTC4 211 aa7.43□□□□□ -1.22
IFT88-204ENST00000461115 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
IFT88-204ENST00000461115 A0A0J9YWU9 116 aa7.42□□□□□ -1.22
IFT88-204ENST00000461115 TMEM262E9PQX1 116 aa7.42□□□□□ -1.22
IFT88-204ENST00000461115 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
IFT88-204ENST00000461115 COX7B2Q8TF08 81 aa7.42□□□□□ -1.22
IFT88-204ENST00000461115 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
IFT88-204ENST00000461115 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
IFT88-204ENST00000461115 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
IFT88-204ENST00000461115 MGAM2Q2M2H8 2515 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 TSPAN13O95857 204 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 HTN3P15516 51 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 REG3AQ06141 175 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 Q8IZM0 81 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 COPS9Q8WXC6 57 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 SPCS1Q9Y6A9 102 aa7.4□□□□□ -1.22
IFT88-204ENST00000461115 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms