RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
SSR4-206ENST00000460616 B4DSR2 109 aa11.17□□□□□ -0.62
SSR4-206ENST00000460616 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
SSR4-206ENST00000460616 AVPP01185 164 aa11.16□□□□□ -0.62
SSR4-206ENST00000460616 PRM2P04554 102 aa11.16□□□□□ -0.62
SSR4-206ENST00000460616 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
SSR4-206ENST00000460616 Q9HAA7 133 aa11.16□□□□□ -0.62
SSR4-206ENST00000460616 MALP21145 153 aa11.16□□□□□ -0.62
SSR4-206ENST00000460616 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 RPS28P62857 69 aaKnown RBP11.15□□□□□ -0.62
SSR4-206ENST00000460616 CFHR3Q02985 330 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
SSR4-206ENST00000460616 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
SSR4-206ENST00000460616 SONP18583 2426 aaKnown RBP11.14□□□□□ -0.63
SSR4-206ENST00000460616 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
SSR4-206ENST00000460616 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
SSR4-206ENST00000460616 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
SSR4-206ENST00000460616 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
SSR4-206ENST00000460616 PSMB8P28062 276 aa11.12□□□□□ -0.63
SSR4-206ENST00000460616 HOXD3P31249 432 aaPredicted RBP11.12□□□□□ -0.63
SSR4-206ENST00000460616 KRTAP1-1Q07627 177 aa11.12□□□□□ -0.63
SSR4-206ENST00000460616 DNAL4O96015 105 aa11.11□□□□□ -0.63
SSR4-206ENST00000460616 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
SSR4-206ENST00000460616 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
SSR4-206ENST00000460616 SMR3AQ99954 134 aa11.11□□□□□ -0.63
SSR4-206ENST00000460616 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
SSR4-206ENST00000460616 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
SSR4-206ENST00000460616 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
SSR4-206ENST00000460616 PF4P02776 101 aa11.1□□□□□ -0.63
SSR4-206ENST00000460616 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
SSR4-206ENST00000460616 RS1O15537 224 aa11.09□□□□□ -0.63
SSR4-206ENST00000460616 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
SSR4-206ENST00000460616 OR13C6PQ8NH95 151 aa11.09□□□□□ -0.63
SSR4-206ENST00000460616 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
SSR4-206ENST00000460616 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
SSR4-206ENST00000460616 C14orf132Q9NPU4 83 aa11.08□□□□□ -0.64
SSR4-206ENST00000460616 HIVEP1P15822 2718 aa11.08□□□□□ -0.64
SSR4-206ENST00000460616 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
SSR4-206ENST00000460616 CRPP02741 224 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 SORL1Q92673 2214 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 CUBNO60494 3623 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 DEFB131AP59861 70 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
SSR4-206ENST00000460616 SERP2Q8N6R1 65 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
SSR4-206ENST00000460616 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 A0A087WYN8 130 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 F5H768 121 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 TMEM258P61165 79 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 Q6JHZ5 121 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
SSR4-206ENST00000460616 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
SSR4-206ENST00000460616 ANK3Q12955 4377 aaKnown RBP11.05□□□□□ -0.64
SSR4-206ENST00000460616 KIR2DL5BQ8NHK3 375 aa11.04□□□□□ -0.64
SSR4-206ENST00000460616 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
SSR4-206ENST00000460616 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
SSR4-206ENST00000460616 J3QLI3 93 aa11.04□□□□□ -0.64
SSR4-206ENST00000460616 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
SSR4-206ENST00000460616 C11orf72Q8NBR9 251 aa11.04□□□□□ -0.64
SSR4-206ENST00000460616 NACAE9PAV3 2078 aa11.04□□□□□ -0.64
SSR4-206ENST00000460616 MTORP42345 2549 aa11.04□□□□□ -0.64
SSR4-206ENST00000460616 A0A087WVE0 104 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 IGKV2-28A0A075B6P5 120 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 IGKV2D-28P01615 120 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 SMIM11BQ8TCY0 68 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
SSR4-206ENST00000460616 OBSCN-AS1Q96MR7 158 aa11.02□□□□□ -0.64
SSR4-206ENST00000460616 FSHBP01225 129 aa11.02□□□□□ -0.65
SSR4-206ENST00000460616 LINC01561Q8N1V8 128 aa11.02□□□□□ -0.65
SSR4-206ENST00000460616 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
SSR4-206ENST00000460616 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 H0YGX0 51 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 CDC42SE2Q9NRR3 84 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 F8P00451 2351 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 A8MTW9 85 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 LY6G6DO95868 133 aa11.01□□□□□ -0.65
SSR4-206ENST00000460616 NTM-AS1Q6ZSK4 140 aa10.99□□□□□ -0.65
SSR4-206ENST00000460616 NCR3O14931 201 aa10.99□□□□□ -0.65
SSR4-206ENST00000460616 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
SSR4-206ENST00000460616 DSCR8Q96T75 97 aa10.99□□□□□ -0.65
SSR4-206ENST00000460616 HIVEP2P31629 2446 aa10.98□□□□□ -0.65
SSR4-206ENST00000460616 LECT2O14960 151 aa10.98□□□□□ -0.65
SSR4-206ENST00000460616 LINC00158P58513 81 aa10.98□□□□□ -0.65
SSR4-206ENST00000460616 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
SSR4-206ENST00000460616 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
SSR4-206ENST00000460616 IGHV4-59P01825 116 aa10.97□□□□□ -0.65
SSR4-206ENST00000460616 COX7B2Q8TF08 81 aa10.97□□□□□ -0.65
SSR4-206ENST00000460616 NSD1Q96L73 2696 aaPredicted RBP10.97□□□□□ -0.65
SSR4-206ENST00000460616 WIPF1O43516 503 aa10.97□□□□□ -0.65
SSR4-206ENST00000460616 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SSR4-206ENST00000460616 OXTP01178 125 aa10.96□□□□□ -0.66
SSR4-206ENST00000460616 MAST4O15021 2626 aa10.95□□□□□ -0.66
SSR4-206ENST00000460616 INSP01308 110 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms