RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 C7orf33Q8WU49 177 aa10.27□□□□□ -0.76
CPSF6-203ENST00000456847 FAM104AQ969W3 186 aa10.27□□□□□ -0.76
CPSF6-203ENST00000456847 MYCBP2O75592 4640 aa10.27□□□□□ -0.76
CPSF6-203ENST00000456847 S100PP25815 95 aa10.27□□□□□ -0.77
CPSF6-203ENST00000456847 Q6ZRU5 148 aa10.27□□□□□ -0.77
CPSF6-203ENST00000456847 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
CPSF6-203ENST00000456847 CYSLTR1Q9Y271 337 aa10.27□□□□□ -0.77
CPSF6-203ENST00000456847 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
CPSF6-203ENST00000456847 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
CPSF6-203ENST00000456847 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
CPSF6-203ENST00000456847 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
CPSF6-203ENST00000456847 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 TRAV9-1A0A075B6T8 112 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 TGIF2-C20orf24A0A0A6YYL0 155 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 ORMDL2Q53FV1 153 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 LOC107984640A0A0U1RRK4 108 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 OR10D4PQ8NGN7 298 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 C2orf48Q96LS8 159 aa10.25□□□□□ -0.77
CPSF6-203ENST00000456847 NXT2Q9NPJ8 142 aaKnown RBP10.25□□□□□ -0.77
CPSF6-203ENST00000456847 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
CPSF6-203ENST00000456847 KIAA1644Q3SXP7 199 aa10.24□□□□□ -0.77
CPSF6-203ENST00000456847 Q6ZN92 141 aa10.24□□□□□ -0.77
CPSF6-203ENST00000456847 TEX43Q6ZNM6 134 aa10.24□□□□□ -0.77
CPSF6-203ENST00000456847 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
CPSF6-203ENST00000456847 IGHV3OR16-9A0A0B4J2B5 98 aa10.23□□□□□ -0.77
CPSF6-203ENST00000456847 GAGE2BQ13066 116 aa10.23□□□□□ -0.77
CPSF6-203ENST00000456847 K7EMI3 77 aa10.23□□□□□ -0.77
CPSF6-203ENST00000456847 OXTP01178 125 aa10.21□□□□□ -0.77
CPSF6-203ENST00000456847 PTTG1IPP53801 180 aa10.21□□□□□ -0.77
CPSF6-203ENST00000456847 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
CPSF6-203ENST00000456847 PKHD1L1Q86WI1 4243 aa10.2□□□□□ -0.78
CPSF6-203ENST00000456847 LINC00242Q5T6M2 205 aa10.2□□□□□ -0.78
CPSF6-203ENST00000456847 A0A0J9YXV3 536 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 NDUFA1O15239 70 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 G0S2P27469 103 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 VCX2Q9H322 139 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 RPS10P5Q9NQ39 176 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
CPSF6-203ENST00000456847 UBE2D1P51668 147 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 RHEBQ15382 184 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
CPSF6-203ENST00000456847 A0A087WZ39 114 aa10.18□□□□□ -0.78
CPSF6-203ENST00000456847 F8WDY8 70 aa10.18□□□□□ -0.78
CPSF6-203ENST00000456847 COX19Q49B96 90 aa10.18□□□□□ -0.78
CPSF6-203ENST00000456847 CARHSP1Q9Y2V2 147 aaKnown RBP10.18□□□□□ -0.78
CPSF6-203ENST00000456847 NPSP0C0P6 89 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 MRPL35Q9NZE8 188 aaKnown RBP10.17□□□□□ -0.78
CPSF6-203ENST00000456847 HERC1Q15751 4861 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 AMELXQ99217 191 aa10.17□□□□□ -0.78
CPSF6-203ENST00000456847 IGIPA6NJ69 53 aa10.16□□□□□ -0.78
CPSF6-203ENST00000456847 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
CPSF6-203ENST00000456847 MT-ND6P03923 174 aa10.15□□□□□ -0.78
CPSF6-203ENST00000456847 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
CPSF6-203ENST00000456847 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
CPSF6-203ENST00000456847 FABP9Q0Z7S8 132 aa10.15□□□□□ -0.79
CPSF6-203ENST00000456847 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.79
CPSF6-203ENST00000456847 C10orf25Q5T742 122 aa10.14□□□□□ -0.79
CPSF6-203ENST00000456847 TIMM17AQ99595 171 aa10.14□□□□□ -0.79
CPSF6-203ENST00000456847 ALKBH7Q9BT30 221 aaPredicted RBP10.14□□□□□ -0.79
CPSF6-203ENST00000456847 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 SCGB3A1Q96QR1 104 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 PRSS2P07478 247 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
CPSF6-203ENST00000456847 FA2HQ7L5A8 372 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 SMCO4Q9NRQ5 59 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 C6orf48Q9UBA6 75 aa10.13□□□□□ -0.79
CPSF6-203ENST00000456847 SEC11AP67812 179 aa10.12□□□□□ -0.79
CPSF6-203ENST00000456847 NDUFA5Q16718 116 aa10.12□□□□□ -0.79
CPSF6-203ENST00000456847 GEMIN7Q9H840 131 aaKnown RBP10.12□□□□□ -0.79
CPSF6-203ENST00000456847 TOMM7Q9P0U1 55 aa10.12□□□□□ -0.79
CPSF6-203ENST00000456847 APOC3P02656 99 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 HERVK_113P63121 156 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 ERASQ7Z444 233 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
CPSF6-203ENST00000456847 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 LRP1Q07954 4544 aaKnown RBP10.11□□□□□ -0.79
CPSF6-203ENST00000456847 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 Q6ZRP5 223 aa10.11□□□□□ -0.79
CPSF6-203ENST00000456847 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
CPSF6-203ENST00000456847 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
CPSF6-203ENST00000456847 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
CPSF6-203ENST00000456847 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
CPSF6-203ENST00000456847 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
CPSF6-203ENST00000456847 TLX1NBP0CAT3 122 aa10.09□□□□□ -0.79
CPSF6-203ENST00000456847 SNAPINO95295 136 aa10.09□□□□□ -0.79
CPSF6-203ENST00000456847 CKS1BP61024 79 aa10.09□□□□□ -0.79
CPSF6-203ENST00000456847 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
CPSF6-203ENST00000456847 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
CPSF6-203ENST00000456847 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
CPSF6-203ENST00000456847 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
CPSF6-203ENST00000456847 SVBPQ8N300 66 aa10.07□□□□□ -0.8
CPSF6-203ENST00000456847 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms