RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 FN1P02751 2386 aaKnown RBP14.27□□□□□ -0.13
CSPG5-203ENST00000456150 TRAV13-1A0A0B4J241 112 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 TRIAP1O43715 76 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 NPC2P61916 151 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 ANKRD29Q8N6D5 301 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 CARD19Q96LW7 228 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 ICOSQ9Y6W8 199 aa14.27□□□□□ -0.13
CSPG5-203ENST00000456150 NSD1Q96L73 2696 aaPredicted RBP14.26□□□□□ -0.13
CSPG5-203ENST00000456150 SMIM1B2RUZ4 78 aa14.26□□□□□ -0.13
CSPG5-203ENST00000456150 H7C423 109 aa14.26□□□□□ -0.13
CSPG5-203ENST00000456150 COX6CP09669 75 aa14.26□□□□□ -0.13
CSPG5-203ENST00000456150 Q9H8V8 135 aa14.26□□□□□ -0.13
CSPG5-203ENST00000456150 CRLF1O75462 422 aa14.24□□□□□ -0.13
CSPG5-203ENST00000456150 LINC01620Q4KN68 170 aa14.24□□□□□ -0.13
CSPG5-203ENST00000456150 COPS9Q8WXC6 57 aa14.24□□□□□ -0.13
CSPG5-203ENST00000456150 TRGV4A0A0C4DH28 118 aa14.24□□□□□ -0.13
CSPG5-203ENST00000456150 SETXQ7Z333 2677 aaKnown RBP14.24□□□□□ -0.13
CSPG5-203ENST00000456150 DAND5Q8N907 189 aa14.22□□□□□ -0.13
CSPG5-203ENST00000456150 LINC01600Q96MT4 127 aa14.21□□□□□ -0.13
CSPG5-203ENST00000456150 F5H768 121 aa14.21□□□□□ -0.14
CSPG5-203ENST00000456150 HERV-K104P63124 156 aa14.21□□□□□ -0.14
CSPG5-203ENST00000456150 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.14
CSPG5-203ENST00000456150 LOC100131303A0A0U1RQF7 123 aa14.2□□□□□ -0.14
CSPG5-203ENST00000456150 RPL13AP40429 203 aaKnown RBP14.2□□□□□ -0.14
CSPG5-203ENST00000456150 CDIP1Q9H305 208 aa14.2□□□□□ -0.14
CSPG5-203ENST00000456150 TRBV10-2A0A0K0K1G8 114 aa14.19□□□□□ -0.14
CSPG5-203ENST00000456150 PRIMA1Q86XR5 153 aa14.19□□□□□ -0.14
CSPG5-203ENST00000456150 ZNF625Q96I27 306 aaPredicted RBP14.19□□□□□ -0.14
CSPG5-203ENST00000456150 FHL2Q14192 279 aa14.18□□□□□ -0.14
CSPG5-203ENST00000456150 F8P00451 2351 aa14.17□□□□□ -0.14
CSPG5-203ENST00000456150 PF4P02776 101 aa14.17□□□□□ -0.14
CSPG5-203ENST00000456150 MEIG1Q5JSS6 88 aa14.17□□□□□ -0.14
CSPG5-203ENST00000456150 TMEM262E9PQX1 116 aa14.16□□□□□ -0.14
CSPG5-203ENST00000456150 KRTAP10-3P60369 221 aa14.16□□□□□ -0.14
CSPG5-203ENST00000456150 TRBV6-8A0A0A6YYG3 113 aa14.15□□□□□ -0.14
CSPG5-203ENST00000456150 SETD2Q9BYW2 2564 aaPredicted RBP14.15□□□□□ -0.14
CSPG5-203ENST00000456150 GAGE6Q13070 117 aa14.14□□□□□ -0.15
CSPG5-203ENST00000456150 PPDPFQ9H3Y8 114 aa14.14□□□□□ -0.15
CSPG5-203ENST00000456150 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
CSPG5-203ENST00000456150 KIR2DL5BQ8NHK3 375 aa14.14□□□□□ -0.15
CSPG5-203ENST00000456150 NTN5Q8WTR8 489 aaPredicted RBP14.14□□□□□ -0.15
CSPG5-203ENST00000456150 A0A0U1RRA0 63 aa14.13□□□□□ -0.15
CSPG5-203ENST00000456150 H3BT86 120 aa14.13□□□□□ -0.15
CSPG5-203ENST00000456150 LST1O00453 97 aa14.13□□□□□ -0.15
CSPG5-203ENST00000456150 LINC00482Q8N8I6 264 aa14.13□□□□□ -0.15
CSPG5-203ENST00000456150 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
CSPG5-203ENST00000456150 C2orf82Q6UX34 121 aa14.12□□□□□ -0.15
CSPG5-203ENST00000456150 CLEC2BQ92478 149 aa14.11□□□□□ -0.15
CSPG5-203ENST00000456150 CHCHD5Q9BSY4 110 aa14.11□□□□□ -0.15
CSPG5-203ENST00000456150 SOSTDC1Q6X4U4 206 aa14.11□□□□□ -0.15
CSPG5-203ENST00000456150 LINC00612Q8N6U2 182 aa14.1□□□□□ -0.15
CSPG5-203ENST00000456150 COX7B2Q8TF08 81 aa14.1□□□□□ -0.15
CSPG5-203ENST00000456150 UBE2WQ96B02 151 aa14.1□□□□□ -0.15
CSPG5-203ENST00000456150 DEFB130BP0DP73 79 aa14.09□□□□□ -0.15
CSPG5-203ENST00000456150 DEFB130AP0DP74 79 aa14.09□□□□□ -0.15
CSPG5-203ENST00000456150 IGLV4-60A0A075B6I1 120 aa14.08□□□□□ -0.15
CSPG5-203ENST00000456150 XGP55808 180 aa14.08□□□□□ -0.15
CSPG5-203ENST00000456150 C2CD3Q4AC94 2353 aa14.08□□□□□ -0.16
CSPG5-203ENST00000456150 IGKV3OR2-268A0A0C4DH90 116 aa14.07□□□□□ -0.16
CSPG5-203ENST00000456150 MT-ATP8P03928 68 aa14.07□□□□□ -0.16
CSPG5-203ENST00000456150 SMIM9A6NGZ8 99 aa14.06□□□□□ -0.16
CSPG5-203ENST00000456150 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
CSPG5-203ENST00000456150 TEX49A0A1B0GTD5 131 aa14.06□□□□□ -0.16
CSPG5-203ENST00000456150 COX7A2LO14548 114 aa14.06□□□□□ -0.16
CSPG5-203ENST00000456150 IGHV3OR16-9A0A0B4J2B5 98 aa14.05□□□□□ -0.16
CSPG5-203ENST00000456150 SHISA2Q6UWI4 295 aa14.05□□□□□ -0.16
CSPG5-203ENST00000456150 TOMM7Q9P0U1 55 aa14.05□□□□□ -0.16
CSPG5-203ENST00000456150 A0A087WZ39 114 aa14.03□□□□□ -0.16
CSPG5-203ENST00000456150 GYPEP15421 78 aa14.03□□□□□ -0.16
CSPG5-203ENST00000456150 X6R8D5 127 aa14.03□□□□□ -0.16
CSPG5-203ENST00000456150 TRAV8-4A0A0B4J246 113 aa14.02□□□□□ -0.16
CSPG5-203ENST00000456150 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.16
CSPG5-203ENST00000456150 A0A1B0GV72 72 aa14.02□□□□□ -0.17
CSPG5-203ENST00000456150 FAM222AQ5U5X8 452 aa14.02□□□□□ -0.17
CSPG5-203ENST00000456150 TRAV13-2A0A0B4J235 113 aa14.01□□□□□ -0.17
CSPG5-203ENST00000456150 PRO0255Q9UI72 69 aa14.01□□□□□ -0.17
CSPG5-203ENST00000456150 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
CSPG5-203ENST00000456150 MIR7-3HGQ8N6C7 128 aa14□□□□□ -0.17
CSPG5-203ENST00000456150 A0A1B0GUV1 79 aa13.99□□□□□ -0.17
CSPG5-203ENST00000456150 TEP1Q99973 2627 aaKnown RBP13.99□□□□□ -0.17
CSPG5-203ENST00000456150 LYRM9A8MSI8 78 aa13.99□□□□□ -0.17
CSPG5-203ENST00000456150 CRPP02741 224 aa13.99□□□□□ -0.17
CSPG5-203ENST00000456150 IBA57-AS1B1ANH7 110 aa13.98□□□□□ -0.17
CSPG5-203ENST00000456150 LINC00158P58513 81 aa13.98□□□□□ -0.17
CSPG5-203ENST00000456150 DEFB121Q5J5C9 76 aa13.97□□□□□ -0.17
CSPG5-203ENST00000456150 C5orf38Q86SI9 138 aa13.97□□□□□ -0.17
CSPG5-203ENST00000456150 TRACP01848 142 aa13.97□□□□□ -0.17
CSPG5-203ENST00000456150 SS18Q15532 418 aa13.97□□□□□ -0.17
CSPG5-203ENST00000456150 SND1-IT1Q9HBX3 110 aa13.97□□□□□ -0.17
CSPG5-203ENST00000456150 TENM1Q9UKZ4 2725 aa13.96□□□□□ -0.17
CSPG5-203ENST00000456150 CKS1BP61024 79 aa13.95□□□□□ -0.18
CSPG5-203ENST00000456150 PAX4O43316 350 aa13.94□□□□□ -0.18
CSPG5-203ENST00000456150 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
CSPG5-203ENST00000456150 SPATA3Q8NHX4 192 aa13.94□□□□□ -0.18
CSPG5-203ENST00000456150 SNCGO76070 127 aa13.94□□□□□ -0.18
CSPG5-203ENST00000456150 APOC4P55056 127 aa13.94□□□□□ -0.18
CSPG5-203ENST00000456150 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
CSPG5-203ENST00000456150 FAM240AA0A1B0GVK7 77 aa13.93□□□□□ -0.18
CSPG5-203ENST00000456150 CITED1Q99966 193 aa13.93□□□□□ -0.18
CSPG5-203ENST00000456150 LINC01561Q8N1V8 128 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms