RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 HSPB8Q9UJY1 196 aa9.42□□□□□ -0.9
HMGXB4-204ENST00000455359 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 NUPR1O60356 82 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 HERVK_113P63121 156 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 IFI27L1Q96BM0 104 aa9.41□□□□□ -0.9
HMGXB4-204ENST00000455359 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
HMGXB4-204ENST00000455359 APOMO95445 188 aa9.4□□□□□ -0.9
HMGXB4-204ENST00000455359 WFDC2Q14508 124 aa9.4□□□□□ -0.9
HMGXB4-204ENST00000455359 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 A0A087WZ39 114 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 TRAV12-1A0A0B4J245 112 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 LECT2O14960 151 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 PRSS1P07477 247 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 MALP21145 153 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 ZC2HC1BQ5TFG8 222 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-204ENST00000455359 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-204ENST00000455359 NDUFA6P56556 154 aa9.38□□□□□ -0.91
HMGXB4-204ENST00000455359 PKD1P98161 4303 aa9.38□□□□□ -0.91
HMGXB4-204ENST00000455359 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
HMGXB4-204ENST00000455359 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
HMGXB4-204ENST00000455359 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
HMGXB4-204ENST00000455359 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 COX6A2Q02221 97 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
HMGXB4-204ENST00000455359 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
HMGXB4-204ENST00000455359 F8WDY8 70 aa9.34□□□□□ -0.91
HMGXB4-204ENST00000455359 FABP4P15090 132 aa9.34□□□□□ -0.91
HMGXB4-204ENST00000455359 LINC00469Q8N7U9 141 aa9.34□□□□□ -0.91
HMGXB4-204ENST00000455359 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-204ENST00000455359 H3BRM9 83 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 ZNF561-AS1K7EIQ3 104 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 S100A6P06703 90 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
HMGXB4-204ENST00000455359 IGLV4-69A0A075B6H9 119 aa9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 F8VRH5 84 aa9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-204ENST00000455359 SPAG11BQ08648 103 aa9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 ORAOV1Q8WV07 137 aa9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 GCSHP23434 173 aa9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 ODF1Q14990 250 aa9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-204ENST00000455359 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-204ENST00000455359 PLNP26678 52 aa9.3□□□□□ -0.92
HMGXB4-204ENST00000455359 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
HMGXB4-204ENST00000455359 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
HMGXB4-204ENST00000455359 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 SYS1-DBNDD2H3BUS1 97 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 Q8IZM0 81 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
HMGXB4-204ENST00000455359 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 SLPIP03973 132 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 PRSS2P07478 247 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 S100A2P29034 98 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
HMGXB4-204ENST00000455359 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 NDUFA1O15239 70 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 DPM2O94777 84 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 CXCL5P42830 114 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
HMGXB4-204ENST00000455359 H0Y8G0 127 aa9.26□□□□□ -0.93
HMGXB4-204ENST00000455359 AKR1D1P51857 326 aa9.26□□□□□ -0.93
HMGXB4-204ENST00000455359 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
HMGXB4-204ENST00000455359 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 SPINK8P0C7L1 97 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 CKS1BP61024 79 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 LINC01545Q5VT33 79 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 HIST1H2BLQ99880 126 aa9.25□□□□□ -0.93
HMGXB4-204ENST00000455359 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 C20orf202A1L168 122 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 IGKCP01834 107 aa9.24□□□□□ -0.93
HMGXB4-204ENST00000455359 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms