RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 VCX2Q9H322 139 aa11.75□□□□□ -0.53
COPS7A-202ENST00000455113 MAPKAPK5-AS1Q8N8E1 139 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 HERC2O95714 4834 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 H0Y8G0 127 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 KRTDAPP60985 99 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 AMELXQ99217 191 aa11.74□□□□□ -0.53
COPS7A-202ENST00000455113 C3orf79P0CE67 100 aa11.73□□□□□ -0.53
COPS7A-202ENST00000455113 PMVKQ15126 192 aa11.73□□□□□ -0.53
COPS7A-202ENST00000455113 OR10D4PQ8NGN7 298 aa11.73□□□□□ -0.53
COPS7A-202ENST00000455113 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-202ENST00000455113 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 REG3AQ06141 175 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
COPS7A-202ENST00000455113 WFDC2Q14508 124 aa11.71□□□□□ -0.54
COPS7A-202ENST00000455113 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.54
COPS7A-202ENST00000455113 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
COPS7A-202ENST00000455113 KRTAP10-1P60331 282 aa11.7□□□□□ -0.54
COPS7A-202ENST00000455113 LRP1BQ9NZR2 4599 aa11.7□□□□□ -0.54
COPS7A-202ENST00000455113 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
COPS7A-202ENST00000455113 TRAV8-4A0A0B4J246 113 aa11.69□□□□□ -0.54
COPS7A-202ENST00000455113 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
COPS7A-202ENST00000455113 ODF1Q14990 250 aa11.68□□□□□ -0.54
COPS7A-202ENST00000455113 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
COPS7A-202ENST00000455113 UBE2D1P51668 147 aa11.67□□□□□ -0.54
COPS7A-202ENST00000455113 CHTOPQ9Y3Y2 248 aaKnown RBP11.67□□□□□ -0.54
COPS7A-202ENST00000455113 RYR1P21817 5038 aa11.67□□□□□ -0.54
COPS7A-202ENST00000455113 Q8N1X5 172 aa11.66□□□□□ -0.54
COPS7A-202ENST00000455113 PMCHL2Q9BQD1 86 aa11.66□□□□□ -0.54
COPS7A-202ENST00000455113 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
COPS7A-202ENST00000455113 DNAH5Q8TE73 4624 aa11.66□□□□□ -0.54
COPS7A-202ENST00000455113 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
COPS7A-202ENST00000455113 LINC01545Q5VT33 79 aa11.66□□□□□ -0.54
COPS7A-202ENST00000455113 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
COPS7A-202ENST00000455113 LOC105371267A0A1B0GV96 52 aa11.65□□□□□ -0.54
COPS7A-202ENST00000455113 F8VRH5 84 aa11.65□□□□□ -0.54
COPS7A-202ENST00000455113 AKR1D1P51857 326 aa11.65□□□□□ -0.54
COPS7A-202ENST00000455113 SS18Q15532 418 aa11.65□□□□□ -0.54
COPS7A-202ENST00000455113 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
COPS7A-202ENST00000455113 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
COPS7A-202ENST00000455113 C20orf202A1L168 122 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 XGP55808 180 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 CCL25O15444 150 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
COPS7A-202ENST00000455113 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-202ENST00000455113 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
COPS7A-202ENST00000455113 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
COPS7A-202ENST00000455113 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
COPS7A-202ENST00000455113 XCL1P47992 114 aa11.61□□□□□ -0.55
COPS7A-202ENST00000455113 SEC11AP67812 179 aa11.61□□□□□ -0.55
COPS7A-202ENST00000455113 COX6A2Q02221 97 aa11.61□□□□□ -0.55
COPS7A-202ENST00000455113 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
COPS7A-202ENST00000455113 DPM2O94777 84 aa11.6□□□□□ -0.55
COPS7A-202ENST00000455113 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
COPS7A-202ENST00000455113 EPM2AB3EWF7 344 aa11.6□□□□□ -0.55
COPS7A-202ENST00000455113 PLNP26678 52 aa11.6□□□□□ -0.55
COPS7A-202ENST00000455113 HERVK_113P63121 156 aa11.6□□□□□ -0.55
COPS7A-202ENST00000455113 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
COPS7A-202ENST00000455113 IGKCP01834 107 aa11.59□□□□□ -0.55
COPS7A-202ENST00000455113 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
COPS7A-202ENST00000455113 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
COPS7A-202ENST00000455113 HSPG2P98160 4391 aa11.58□□□□□ -0.56
COPS7A-202ENST00000455113 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 PYY3Q5JQD4 70 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 ATOH7Q8N100 152 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 LINC00469Q8N7U9 141 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
COPS7A-202ENST00000455113 LINC01620Q4KN68 170 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 CFAP161Q6P656 301 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
COPS7A-202ENST00000455113 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
COPS7A-202ENST00000455113 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
COPS7A-202ENST00000455113 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
COPS7A-202ENST00000455113 FOXI1Q12951 378 aa11.56□□□□□ -0.56
COPS7A-202ENST00000455113 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
COPS7A-202ENST00000455113 HAMPP81172 84 aa11.55□□□□□ -0.56
COPS7A-202ENST00000455113 FAM30AQ9NZY2 134 aa11.55□□□□□ -0.56
COPS7A-202ENST00000455113 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
COPS7A-202ENST00000455113 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
COPS7A-202ENST00000455113 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
COPS7A-202ENST00000455113 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
COPS7A-202ENST00000455113 COX7A2LO14548 114 aa11.53□□□□□ -0.56
COPS7A-202ENST00000455113 Q5VSD8 79 aa11.53□□□□□ -0.56
COPS7A-202ENST00000455113 Q6ZSA8 131 aa11.53□□□□□ -0.56
COPS7A-202ENST00000455113 A0A087WZ39 114 aa11.52□□□□□ -0.56
COPS7A-202ENST00000455113 H3BRM9 83 aa11.52□□□□□ -0.56
COPS7A-202ENST00000455113 KRTAP17-1Q9BYP8 105 aa11.52□□□□□ -0.56
COPS7A-202ENST00000455113 STPG4Q8N801 248 aa11.52□□□□□ -0.57
COPS7A-202ENST00000455113 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
COPS7A-202ENST00000455113 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
COPS7A-202ENST00000455113 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms