RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
NELFE-207ENST00000454913 LBHQ53QV2 105 aaPredicted RBP8.93□□□□□ -0.98
NELFE-207ENST00000454913 LINC00242Q5T6M2 205 aa8.93□□□□□ -0.98
NELFE-207ENST00000454913 MANBALQ9NQG1 85 aa8.93□□□□□ -0.98
NELFE-207ENST00000454913 IGKV2D-26A0A0A0MRZ7 120 aa8.92□□□□□ -0.98
NELFE-207ENST00000454913 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
NELFE-207ENST00000454913 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
NELFE-207ENST00000454913 UMAD1C9J7I0 102 aa8.92□□□□□ -0.98
NELFE-207ENST00000454913 BCE1O60756 84 aa8.92□□□□□ -0.98
NELFE-207ENST00000454913 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
NELFE-207ENST00000454913 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
NELFE-207ENST00000454913 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
NELFE-207ENST00000454913 VCYO14598 125 aa8.9□□□□□ -0.98
NELFE-207ENST00000454913 ARPC5O15511 151 aa8.9□□□□□ -0.98
NELFE-207ENST00000454913 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
NELFE-207ENST00000454913 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
NELFE-207ENST00000454913 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
NELFE-207ENST00000454913 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
NELFE-207ENST00000454913 MED9Q9NWA0 146 aa8.89□□□□□ -0.99
NELFE-207ENST00000454913 CTAG1AP78358 180 aa8.88□□□□□ -0.99
NELFE-207ENST00000454913 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
NELFE-207ENST00000454913 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
NELFE-207ENST00000454913 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
NELFE-207ENST00000454913 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
NELFE-207ENST00000454913 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
NELFE-207ENST00000454913 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
NELFE-207ENST00000454913 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
NELFE-207ENST00000454913 IFITM10A6NMD0 228 aa8.86□□□□□ -0.99
NELFE-207ENST00000454913 PDE6DO43924 150 aa8.86□□□□□ -0.99
NELFE-207ENST00000454913 UBE2AP49459 152 aa8.86□□□□□ -0.99
NELFE-207ENST00000454913 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
NELFE-207ENST00000454913 FP248Q71RG6 208 aaPredicted RBP8.86□□□□□ -0.99
NELFE-207ENST00000454913 XAGE1AQ9HD64 81 aa8.86□□□□□ -0.99
NELFE-207ENST00000454913 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
NELFE-207ENST00000454913 SMKR1H3BMG3 65 aa8.85□□□□□ -0.99
NELFE-207ENST00000454913 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
NELFE-207ENST00000454913 HBBP68871 147 aa8.84□□□□□ -0.99
NELFE-207ENST00000454913 K7EN84 100 aa8.83□□□□□ -1
NELFE-207ENST00000454913 RAB4AP20338 218 aa8.83□□□□□ -1
NELFE-207ENST00000454913 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
NELFE-207ENST00000454913 RPL39P62891 51 aaKnown RBP8.83□□□□□ -1
NELFE-207ENST00000454913 LCE2CQ5TA81 110 aa8.83□□□□□ -1
NELFE-207ENST00000454913 AMN1Q8IY45 258 aa8.83□□□□□ -1
NELFE-207ENST00000454913 TMEM191AQ9H0A3 160 aa8.83□□□□□ -1
NELFE-207ENST00000454913 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
NELFE-207ENST00000454913 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.82□□□□□ -1
NELFE-207ENST00000454913 GATCO43716 136 aaKnown RBP8.82□□□□□ -1
NELFE-207ENST00000454913 A8MWL6 223 aa8.81□□□□□ -1
NELFE-207ENST00000454913 MT1HP80294 61 aa8.81□□□□□ -1
NELFE-207ENST00000454913 OCC1Q8TAD7 63 aa8.81□□□□□ -1
NELFE-207ENST00000454913 GAGE10A6NGK3 116 aa8.8□□□□□ -1
NELFE-207ENST00000454913 TEX46H3BTG2 121 aa8.8□□□□□ -1
NELFE-207ENST00000454913 PPP1R17O96001 155 aa8.8□□□□□ -1
NELFE-207ENST00000454913 PRSS2P07478 247 aa8.8□□□□□ -1
NELFE-207ENST00000454913 CKS1BP61024 79 aa8.8□□□□□ -1
NELFE-207ENST00000454913 FAM104AQ969W3 186 aa8.8□□□□□ -1
NELFE-207ENST00000454913 LINC00167Q96N53 147 aa8.8□□□□□ -1
NELFE-207ENST00000454913 A0A1B0GUT8 65 aa8.79□□□□□ -1
NELFE-207ENST00000454913 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
NELFE-207ENST00000454913 NRACQ8N912 160 aa8.79□□□□□ -1
NELFE-207ENST00000454913 SPANXA1Q9NS26 97 aa8.79□□□□□ -1
NELFE-207ENST00000454913 TOMM7Q9P0U1 55 aa8.79□□□□□ -1
NELFE-207ENST00000454913 PPP1R2P9O14990 202 aa8.78□□□□□ -1
NELFE-207ENST00000454913 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
NELFE-207ENST00000454913 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
NELFE-207ENST00000454913 C3orf22Q8N5N4 141 aa8.78□□□□□ -1
NELFE-207ENST00000454913 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
NELFE-207ENST00000454913 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
NELFE-207ENST00000454913 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
NELFE-207ENST00000454913 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
NELFE-207ENST00000454913 KANTRA0A1W2PQU2 76 aa8.75□□□□□ -1.01
NELFE-207ENST00000454913 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
NELFE-207ENST00000454913 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
NELFE-207ENST00000454913 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
NELFE-207ENST00000454913 SMLR1H3BR10 107 aa8.74□□□□□ -1.01
NELFE-207ENST00000454913 TCAPO15273 167 aa8.74□□□□□ -1.01
NELFE-207ENST00000454913 PRLHP81277 87 aa8.74□□□□□ -1.01
NELFE-207ENST00000454913 PNRC1Q12796 327 aaPredicted RBP8.74□□□□□ -1.01
NELFE-207ENST00000454913 ZNF345Q14585 488 aa8.74□□□□□ -1.01
NELFE-207ENST00000454913 CT83Q5H943 113 aa8.72□□□□□ -1.01
NELFE-207ENST00000454913 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
NELFE-207ENST00000454913 DAND5Q8N907 189 aa8.72□□□□□ -1.01
NELFE-207ENST00000454913 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.02
NELFE-207ENST00000454913 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 Q6ZN92 141 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
NELFE-207ENST00000454913 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.02
NELFE-207ENST00000454913 M0R2T5 61 aa8.7□□□□□ -1.02
NELFE-207ENST00000454913 RIGQ13278 110 aa8.7□□□□□ -1.02
NELFE-207ENST00000454913 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
NELFE-207ENST00000454913 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
NELFE-207ENST00000454913 Q8IZM0 81 aa8.69□□□□□ -1.02
NELFE-207ENST00000454913 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
NELFE-207ENST00000454913 F8VRH5 84 aa8.68□□□□□ -1.02
NELFE-207ENST00000454913 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
NELFE-207ENST00000454913 IGLV4-3A0A075B6K6 122 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms