RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 Q6ZRU5 148 aa6.73□□□□□ -1.33
DDX39A-203ENST00000454233 OR10D4PQ8NGN7 298 aa6.73□□□□□ -1.33
DDX39A-203ENST00000454233 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 UQCC3Q6UW78 93 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 ORAOV1Q8WV07 137 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 CTDSP1Q9GZU7 261 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
DDX39A-203ENST00000454233 TGIF2-C20orf24A0A0A6YYL0 155 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 IGHV3OR16-9A0A0B4J2B5 98 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 F8WDY8 70 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 Q8N8P6 123 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 TMEM141Q96I45 108 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 IMMP2LQ96T52 175 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 CYSLTR1Q9Y271 337 aa6.71□□□□□ -1.34
DDX39A-203ENST00000454233 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 TMEM218A2RU14 115 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 Q6ZN92 141 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 TEX43Q6ZNM6 134 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
DDX39A-203ENST00000454233 NXT2Q9NPJ8 142 aaKnown RBP6.7□□□□□ -1.34
DDX39A-203ENST00000454233 K7EMI3 77 aa6.69□□□□□ -1.34
DDX39A-203ENST00000454233 NDUFA1O15239 70 aa6.69□□□□□ -1.34
DDX39A-203ENST00000454233 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
DDX39A-203ENST00000454233 RPL18AQ02543 176 aaKnown RBP6.69□□□□□ -1.34
DDX39A-203ENST00000454233 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
DDX39A-203ENST00000454233 TRAV9-1A0A075B6T8 112 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
DDX39A-203ENST00000454233 ADCYAP1P18509 176 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 S100PP25815 95 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 G0S2P27469 103 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 IFITM2Q01629 132 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 LINC00242Q5T6M2 205 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 VCX2Q9H322 139 aa6.68□□□□□ -1.34
DDX39A-203ENST00000454233 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
DDX39A-203ENST00000454233 A0A087WZ39 114 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 A0A0J9YXV3 536 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 NPSP0C0P6 89 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 PAPPA-AS1Q5QFB9 102 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 Q6ZRP5 223 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 SEC11CQ9BY50 192 aa6.67□□□□□ -1.34
DDX39A-203ENST00000454233 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
DDX39A-203ENST00000454233 UBE2D1P51668 147 aa6.66□□□□□ -1.34
DDX39A-203ENST00000454233 KIAA1644Q3SXP7 199 aa6.66□□□□□ -1.34
DDX39A-203ENST00000454233 C9orf116Q5BN46 136 aaPredicted RBP6.66□□□□□ -1.34
DDX39A-203ENST00000454233 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
DDX39A-203ENST00000454233 COMMD7Q86VX2 200 aa6.66□□□□□ -1.34
DDX39A-203ENST00000454233 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
DDX39A-203ENST00000454233 AMELXQ99217 191 aa6.65□□□□□ -1.34
DDX39A-203ENST00000454233 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
DDX39A-203ENST00000454233 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 PRSS2P07478 247 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 TLX1NBP0CAT3 122 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 SEC11AP67812 179 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 COX19Q49B96 90 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 C10orf25Q5T742 122 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
DDX39A-203ENST00000454233 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 MT1HL1P0DM35 61 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 REG3GQ6UW15 175 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 TOMM6Q96B49 74 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
DDX39A-203ENST00000454233 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
DDX39A-203ENST00000454233 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 MT-ND6P03923 174 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 HERVK_113P63121 156 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 RHEBQ15382 184 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 C2orf82Q6UX34 121 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 SCGB3A1Q96QR1 104 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 GEMIN7Q9H840 131 aaKnown RBP6.62□□□□□ -1.35
DDX39A-203ENST00000454233 TOMM7Q9P0U1 55 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
DDX39A-203ENST00000454233 CKS1BP61024 79 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
DDX39A-203ENST00000454233 ERASQ7Z444 233 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 FAM19A3Q7Z5A8 133 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 LINC01600Q96MT4 127 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
DDX39A-203ENST00000454233 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
DDX39A-203ENST00000454233 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
DDX39A-203ENST00000454233 C10orf91Q5T1B1 145 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 FA2HQ7L5A8 372 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
DDX39A-203ENST00000454233 Q8IZM0 81 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
DDX39A-203ENST00000454233 SMCO4Q9NRQ5 59 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms