RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	OR10D4P	Q8NGN7	298 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	SCRT2	Q9NQ03	307 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	XAGE1A	Q9HD64	81 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	IGKV2D-26	A0A0A0MRZ7	120 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	SNAI2	O43623	268 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	UFSP1	Q6NVU6	142 aa		5.89	□□□□□ -1.47
HCG18-238	ENST00000449544	FAM19A1	Q7Z5A9	133 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	NTN5	Q8WTR8	489 aa	Predicted RBP	5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	SMIM27	A0A1W2PRY6	76 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544		C9JQL5	133 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	ATOH7	Q8N100	152 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	C11orf72	Q8NBR9	251 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	COLCA2	A8K830	154 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	IGLC6	P0CF74	106 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	CRIP1	P50238	77 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	FOXI1	Q12951	378 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	VPS25	Q9BRG1	176 aa		5.88	□□□□□ -1.47
HCG18-238	ENST00000449544	SERF1A	O75920	110 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	KLK9	Q2XQG4	91 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	C9orf153	Q5TBE3	101 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	LINC00959	A0A1B0GUT2	108 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	IBA57-AS1	B1ANH7	110 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	ZC2HC1B	Q5TFG8	222 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	CDPF1	Q6NVV7	123 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	CSNK1G2-AS1	Q8NCQ2	148 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	SNHG12	Q9BXW3	62 aa		5.87	□□□□□ -1.47
HCG18-238	ENST00000449544	LOC107984156	A0A0G2JMH3	177 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	DNAH10OS	P0CZ25	163 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	C1orf137	Q5JT78	98 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	DNLZ	Q5SXM8	178 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	ARL17A	Q8IVW1	177 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	FABP2	P12104	132 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	ZFHX3	Q15911	3703 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	PKD1L1	Q8TDX9	2849 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544		A0A096LNI7	61 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	LINC01620	Q4KN68	170 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	DEFB105A	Q8NG35	78 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	MLST8	Q9BVC4	326 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	FBN2	P35556	2912 aa		5.86	□□□□□ -1.47
HCG18-238	ENST00000449544	REG3G	Q6UW15	175 aa		5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	OTOG	Q6ZRI0	2925 aa		5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	PAM16	Q9Y3D7	125 aa		5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	TNP2	Q05952	138 aa		5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	MAPKAPK5-AS1	Q8N8E1	139 aa		5.85	□□□□□ -1.47
HCG18-238	ENST00000449544	HAMP	P81172	84 aa		5.84	□□□□□ -1.47
HCG18-238	ENST00000449544	RPL28	P46779	137 aa	Known RBP	5.84	□□□□□ -1.48
HCG18-238	ENST00000449544	NHP2	Q9NX24	153 aa	Known RBP	5.84	□□□□□ -1.48
HCG18-238	ENST00000449544	HERV-K104	P63124	156 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	LAMTOR3	Q9UHA4	124 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544		A0A087WTM6	91 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	RPL37A	P61513	92 aa	Known RBP	5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	PYY3	Q5JQD4	70 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	RELN	P78509	3460 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544		F8VRH5	84 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	GIG44	P09565	113 aa	Predicted RBP	5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	SLC25A34	Q6PIV7	304 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	LAMA5	O15230	3695 aa		5.83	□□□□□ -1.48
HCG18-238	ENST00000449544	IGLV4-60	A0A075B6I1	120 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	TRBV24-1	A0A075B6N3	115 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	PLAC8L1	A1L4L8	177 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544		M0QXV9	152 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	PET117	Q6UWS5	81 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	MRPL35	Q9NZE8	188 aa	Known RBP	5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	TENM3	Q9P273	2699 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	ASPM	Q8IZT6	3477 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	TENM2	Q9NT68	2774 aa		5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	RPL32	P62910	135 aa	Known RBP	5.82	□□□□□ -1.48
HCG18-238	ENST00000449544	PDZD2	O15018	2839 aa		5.81	□□□□□ -1.48
HCG18-238	ENST00000449544	ZNF575	Q86XF7	245 aa		5.81	□□□□□ -1.48
HCG18-238	ENST00000449544	C18orf32	Q8TCD1	76 aa		5.81	□□□□□ -1.48
HCG18-238	ENST00000449544	TRBV6-5	A0A0K0K1A5	114 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544		J3QQQ9	107 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544		M0R143	59 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	IGKV2-28	A0A075B6P5	120 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	TRBV27	A0A0K0K1C4	114 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	NCR3	O14931	201 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	IGKV2D-28	P01615	120 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	C2orf82	Q6UX34	121 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	CDKN2A-AS1	Q9UH64	79 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544		A0A1B0GUV1	79 aa		5.8	□□□□□ -1.48
HCG18-238	ENST00000449544	NPS	P0C0P6	89 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	ESD	P10768	282 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	DDT	P30046	118 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	C9orf116	Q5BN46	136 aa	Predicted RBP	5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	PTH2	Q96A98	100 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	C14orf144	Q96I85	54 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	CDC42SE2	Q9NRR3	84 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	FUS	P35637	526 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	TG	P01266	2768 aa		5.79	□□□□□ -1.48
HCG18-238	ENST00000449544	RPL37AP8	A6NKH3	93 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	PPDPF	Q9H3Y8	114 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	ERG28	Q9UKR5	140 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	TSHB	P01222	138 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	SND1-IT1	Q9HBX3	110 aa		5.78	□□□□□ -1.48
HCG18-238	ENST00000449544	DIRC1	Q969H9	104 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	LINC00694	P0DN24	101 aa		5.77	□□□□□ -1.49
HCG18-238	ENST00000449544	C10orf91	Q5T1B1	145 aa		5.77	□□□□□ -1.49

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