RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
LMNA-208ENST00000448611 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
LMNA-208ENST00000448611 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
LMNA-208ENST00000448611 RBX1P62877 108 aa12.25□□□□□ -0.45
LMNA-208ENST00000448611 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
LMNA-208ENST00000448611 A0A1B0GWB2 263 aa12.24□□□□□ -0.45
LMNA-208ENST00000448611 VAMP3Q15836 100 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 NOTCH1P46531 2555 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 IGKV3OR2-268A0A0C4DH90 116 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 H3BUT2 72 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
LMNA-208ENST00000448611 SH2D6Q7Z4S9 175 aa12.22□□□□□ -0.45
LMNA-208ENST00000448611 LITAFQ99732 161 aa12.22□□□□□ -0.45
LMNA-208ENST00000448611 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
LMNA-208ENST00000448611 TMEM238C9JI98 176 aa12.21□□□□□ -0.45
LMNA-208ENST00000448611 PRB2P02812 416 aaPredicted RBP12.21□□□□□ -0.45
LMNA-208ENST00000448611 UBE2V1Q13404 147 aa12.21□□□□□ -0.45
LMNA-208ENST00000448611 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
LMNA-208ENST00000448611 TMEM238LA0A1B0GVL6 79 aa12.21□□□□□ -0.46
LMNA-208ENST00000448611 A6NJY4 79 aa12.21□□□□□ -0.46
LMNA-208ENST00000448611 NDUFA1O15239 70 aa12.21□□□□□ -0.46
LMNA-208ENST00000448611 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
LMNA-208ENST00000448611 KPRPQ5T749 579 aaPredicted RBP12.2□□□□□ -0.46
LMNA-208ENST00000448611 IGHV3OR16-9A0A0B4J2B5 98 aa12.19□□□□□ -0.46
LMNA-208ENST00000448611 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
LMNA-208ENST00000448611 CCL25O15444 150 aa12.19□□□□□ -0.46
LMNA-208ENST00000448611 Q6ZTC4 211 aa12.19□□□□□ -0.46
LMNA-208ENST00000448611 K7EIL1 84 aa12.18□□□□□ -0.46
LMNA-208ENST00000448611 LELP1Q5T871 98 aa12.18□□□□□ -0.46
LMNA-208ENST00000448611 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
LMNA-208ENST00000448611 H3BNG1 76 aa12.17□□□□□ -0.46
LMNA-208ENST00000448611 IGLL5B9A064 214 aa12.17□□□□□ -0.46
LMNA-208ENST00000448611 ADAMTSL4-AS1Q5T5F5 129 aa12.17□□□□□ -0.46
LMNA-208ENST00000448611 TIMM17BO60830 172 aa12.16□□□□□ -0.46
LMNA-208ENST00000448611 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
LMNA-208ENST00000448611 Q8N3U1 123 aa12.16□□□□□ -0.46
LMNA-208ENST00000448611 Q9H8V8 135 aa12.16□□□□□ -0.46
LMNA-208ENST00000448611 A0A087WZ39 114 aa12.15□□□□□ -0.46
LMNA-208ENST00000448611 ZNF625Q96I27 306 aaPredicted RBP12.15□□□□□ -0.46
LMNA-208ENST00000448611 SPANXDQ9BXN6 97 aa12.15□□□□□ -0.46
LMNA-208ENST00000448611 SPANXCQ9NY87 97 aa12.15□□□□□ -0.46
LMNA-208ENST00000448611 SS18Q15532 418 aa12.14□□□□□ -0.47
LMNA-208ENST00000448611 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
LMNA-208ENST00000448611 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
LMNA-208ENST00000448611 A4D1N5 150 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 CFC1BP0CG36 223 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 CFC1P0CG37 223 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
LMNA-208ENST00000448611 MIAQ16674 131 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 TM2D3Q9BRN9 247 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
LMNA-208ENST00000448611 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
LMNA-208ENST00000448611 K7EP34 96 aa12.12□□□□□ -0.47
LMNA-208ENST00000448611 APOMO95445 188 aa12.12□□□□□ -0.47
LMNA-208ENST00000448611 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
LMNA-208ENST00000448611 FABP2P12104 132 aa12.12□□□□□ -0.47
LMNA-208ENST00000448611 C5orf38Q86SI9 138 aa12.12□□□□□ -0.47
LMNA-208ENST00000448611 TENM3Q9P273 2699 aa12.12□□□□□ -0.47
LMNA-208ENST00000448611 GAGE10A6NGK3 116 aa12.11□□□□□ -0.47
LMNA-208ENST00000448611 XCL1P47992 114 aa12.11□□□□□ -0.47
LMNA-208ENST00000448611 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
LMNA-208ENST00000448611 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
LMNA-208ENST00000448611 REG3AQ06141 175 aa12.11□□□□□ -0.47
LMNA-208ENST00000448611 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
LMNA-208ENST00000448611 PRSS2P07478 247 aa12.1□□□□□ -0.47
LMNA-208ENST00000448611 HERV-K104P63124 156 aa12.1□□□□□ -0.47
LMNA-208ENST00000448611 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
LMNA-208ENST00000448611 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
LMNA-208ENST00000448611 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
LMNA-208ENST00000448611 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
LMNA-208ENST00000448611 DEFB131BA0A096LNP1 70 aa12.09□□□□□ -0.47
LMNA-208ENST00000448611 MRAPQ8TCY5 172 aa12.08□□□□□ -0.48
LMNA-208ENST00000448611 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
LMNA-208ENST00000448611 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 TSPAN13O95857 204 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 IFITM1P13164 125 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 DAND5Q8N907 189 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
LMNA-208ENST00000448611 LINC01561Q8N1V8 128 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
LMNA-208ENST00000448611 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
LMNA-208ENST00000448611 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
LMNA-208ENST00000448611 NPC2P61916 151 aa12.05□□□□□ -0.48
LMNA-208ENST00000448611 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
LMNA-208ENST00000448611 MEIG1Q5JSS6 88 aa12.05□□□□□ -0.48
LMNA-208ENST00000448611 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
LMNA-208ENST00000448611 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
LMNA-208ENST00000448611 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
LMNA-208ENST00000448611 ESRGQ1W209 222 aa12.03□□□□□ -0.48
LMNA-208ENST00000448611 WFDC10BQ8IUB3 73 aa12.03□□□□□ -0.48
LMNA-208ENST00000448611 COX7A2LO14548 114 aa12.02□□□□□ -0.49
LMNA-208ENST00000448611 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
LMNA-208ENST00000448611 FOXI1Q12951 378 aa12.02□□□□□ -0.49
LMNA-208ENST00000448611 ENHOQ6UWT2 76 aa12.02□□□□□ -0.49
LMNA-208ENST00000448611 Q8IZM0 81 aa12.02□□□□□ -0.49
LMNA-208ENST00000448611 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms