RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CEMP1Q6PRD7 247 aaPredicted RBP6.24□□□□□ -1.41
PTPN3-204ENST00000446349 PLA2G2EQ9NZK7 142 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 POLR2KP53803 58 aaKnown RBP6.24□□□□□ -1.41
PTPN3-204ENST00000446349 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
PTPN3-204ENST00000446349 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 C2orf48Q96LS8 159 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 IGKV3D-7A0A0C4DH55 119 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 NRACQ8N912 160 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 CRIP1P50238 77 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 Q6JHZ5 121 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
PTPN3-204ENST00000446349 C10orf99Q6UWK7 81 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 Q6ZPA2 131 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 Q8N2B8 174 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 ZNF295-AS1Q8N0V1 137 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 IGLV2-11P01706 119 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 ODF3L2Q3SX64 289 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 PIEZO2Q9H5I5 2752 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
PTPN3-204ENST00000446349 M0R2N4 97 aa6.21□□□□□ -1.42
PTPN3-204ENST00000446349 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
PTPN3-204ENST00000446349 COX8CQ7Z4L0 72 aa6.21□□□□□ -1.42
PTPN3-204ENST00000446349 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
PTPN3-204ENST00000446349 CCKP06307 115 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 FN1P02751 2386 aaKnown RBP6.2□□□□□ -1.42
PTPN3-204ENST00000446349 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 AVPP01185 164 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 C18orf65Q6ZTR6 163 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
PTPN3-204ENST00000446349 COL27A1Q8IZC6 1860 aaPredicted RBP6.2□□□□□ -1.42
PTPN3-204ENST00000446349 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
PTPN3-204ENST00000446349 DOPEY1Q5JWR5 2465 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 PRYO14603 147 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 H3BNG1 76 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 M0QXV9 152 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 PROK1P58294 105 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 REG3GQ6UW15 175 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 FHL3Q13643 280 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 NUPR1O60356 82 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 ABCA12Q86UK0 2595 aa6.19□□□□□ -1.42
PTPN3-204ENST00000446349 CDSNQ15517 529 aa6.18□□□□□ -1.42
PTPN3-204ENST00000446349 RNASE8Q8TDE3 154 aaKnown RBP6.18□□□□□ -1.42
PTPN3-204ENST00000446349 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
PTPN3-204ENST00000446349 COL4A2P08572 1712 aa6.18□□□□□ -1.42
PTPN3-204ENST00000446349 Q6ZS46 218 aa6.18□□□□□ -1.42
PTPN3-204ENST00000446349 PCSK5Q92824 1860 aa6.18□□□□□ -1.42
PTPN3-204ENST00000446349 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 CYSRT1A8MQ03 144 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 WFDC10AQ9H1F0 79 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 ANKRD11Q6UB99 2663 aaPredicted RBP6.17□□□□□ -1.42
PTPN3-204ENST00000446349 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 NDUFC2-KCTD14E9PQ53 114 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 WFDC2Q14508 124 aa6.17□□□□□ -1.42
PTPN3-204ENST00000446349 C2CD3Q4AC94 2353 aa6.16□□□□□ -1.42
PTPN3-204ENST00000446349 FHL2Q14192 279 aa6.16□□□□□ -1.42
PTPN3-204ENST00000446349 SMR3AQ99954 134 aa6.16□□□□□ -1.42
PTPN3-204ENST00000446349 C1orf158Q8N1D5 194 aa6.16□□□□□ -1.42
PTPN3-204ENST00000446349 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
PTPN3-204ENST00000446349 Q6ZTC4 211 aa6.15□□□□□ -1.42
PTPN3-204ENST00000446349 LST1O00453 97 aa6.15□□□□□ -1.43
PTPN3-204ENST00000446349 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.43
PTPN3-204ENST00000446349 UQCRQO14949 82 aa6.15□□□□□ -1.43
PTPN3-204ENST00000446349 A0A096LNI7 61 aa6.15□□□□□ -1.43
PTPN3-204ENST00000446349 NDUFV3P56181 108 aaKnown RBP6.15□□□□□ -1.43
PTPN3-204ENST00000446349 MUC4Q99102 2169 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 Q6ZQY7 126 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 LOC100131303A0A0U1RQF7 123 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 FAM240AA0A1B0GVK7 77 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 TRIAP1O43715 76 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 PRR9Q5T870 116 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 ANKRD17O75179 2603 aaKnown RBP6.14□□□□□ -1.43
PTPN3-204ENST00000446349 Q8N9L7 120 aa6.14□□□□□ -1.43
PTPN3-204ENST00000446349 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
PTPN3-204ENST00000446349 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
PTPN3-204ENST00000446349 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
PTPN3-204ENST00000446349 SMIM11BQ8TCY0 68 aa6.13□□□□□ -1.43
PTPN3-204ENST00000446349 TTTY13Q9BZ97 58 aa6.13□□□□□ -1.43
PTPN3-204ENST00000446349 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 LYPD5Q6UWN5 251 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 JMJD1CQ15652 2540 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 TLN2Q9Y4G6 2542 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 LINC01556Q5JQF7 62 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 WFDC10BQ8IUB3 73 aa6.12□□□□□ -1.43
PTPN3-204ENST00000446349 RPL37AP8A6NKH3 93 aa6.11□□□□□ -1.43
PTPN3-204ENST00000446349 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
PTPN3-204ENST00000446349 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
PTPN3-204ENST00000446349 POM121L12Q8N7R1 296 aa6.11□□□□□ -1.43
PTPN3-204ENST00000446349 USP9XQ93008 2570 aaPredicted RBP6.1□□□□□ -1.43
PTPN3-204ENST00000446349 C6orf223Q8N319 242 aa6.1□□□□□ -1.43
PTPN3-204ENST00000446349 AMELXQ99217 191 aa6.1□□□□□ -1.43
PTPN3-204ENST00000446349 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
PTPN3-204ENST00000446349 A0A1B0GW54 56 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms