RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 IGLV4-69A0A075B6H9 119 aa13.68□□□□□ -0.22
SHANK3-203ENST00000445220 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
SHANK3-203ENST00000445220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.68□□□□□ -0.22
SHANK3-203ENST00000445220 FAM19A1Q7Z5A9 133 aa13.68□□□□□ -0.22
SHANK3-203ENST00000445220 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
SHANK3-203ENST00000445220 C4orf48Q5BLP8 95 aa13.67□□□□□ -0.22
SHANK3-203ENST00000445220 A0A096LNJ9 63 aa13.67□□□□□ -0.22
SHANK3-203ENST00000445220 LOC107984640A0A0U1RRK4 108 aa13.67□□□□□ -0.22
SHANK3-203ENST00000445220 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
SHANK3-203ENST00000445220 EPG5Q9HCE0 2579 aa13.67□□□□□ -0.22
SHANK3-203ENST00000445220 INAFM1C9JVW0 142 aa13.66□□□□□ -0.22
SHANK3-203ENST00000445220 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
SHANK3-203ENST00000445220 Q8N9L7 120 aa13.66□□□□□ -0.22
SHANK3-203ENST00000445220 IGKV2-24A0A0C4DH68 120 aa13.66□□□□□ -0.22
SHANK3-203ENST00000445220 A0A096LNI7 61 aa13.66□□□□□ -0.22
SHANK3-203ENST00000445220 PPDPFQ9H3Y8 114 aa13.65□□□□□ -0.22
SHANK3-203ENST00000445220 FAM30AQ9NZY2 134 aa13.65□□□□□ -0.22
SHANK3-203ENST00000445220 M0R378 163 aa13.65□□□□□ -0.22
SHANK3-203ENST00000445220 TSPEAR-AS2P59090 65 aa13.65□□□□□ -0.22
SHANK3-203ENST00000445220 DHRS4-AS1Q9P1J3 65 aa13.65□□□□□ -0.22
SHANK3-203ENST00000445220 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
SHANK3-203ENST00000445220 COX17Q14061 63 aa13.64□□□□□ -0.23
SHANK3-203ENST00000445220 Q8N6K4 173 aa13.64□□□□□ -0.23
SHANK3-203ENST00000445220 ABCA2Q9BZC7 2435 aa13.64□□□□□ -0.23
SHANK3-203ENST00000445220 A0A0J9YWU9 116 aa13.63□□□□□ -0.23
SHANK3-203ENST00000445220 MUC7Q8TAX7 377 aa13.63□□□□□ -0.23
SHANK3-203ENST00000445220 DSCAMO60469 2012 aa13.63□□□□□ -0.23
SHANK3-203ENST00000445220 LRRK2Q5S007 2527 aa13.63□□□□□ -0.23
SHANK3-203ENST00000445220 LINC00959A0A1B0GUT2 108 aa13.62□□□□□ -0.23
SHANK3-203ENST00000445220 TRBV7-7A0A0K0K1E9 115 aa13.62□□□□□ -0.23
SHANK3-203ENST00000445220 PRYO14603 147 aa13.62□□□□□ -0.23
SHANK3-203ENST00000445220 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
SHANK3-203ENST00000445220 PIEZO2Q9H5I5 2752 aa13.62□□□□□ -0.23
SHANK3-203ENST00000445220 ZNF73O43830 326 aaPredicted RBP13.61□□□□□ -0.23
SHANK3-203ENST00000445220 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
SHANK3-203ENST00000445220 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
SHANK3-203ENST00000445220 SYCNQ0VAF6 134 aa13.61□□□□□ -0.23
SHANK3-203ENST00000445220 KIAA1549Q9HCM3 1950 aa13.61□□□□□ -0.23
SHANK3-203ENST00000445220 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 Q6ZSV7 163 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 CELA1Q9UNI1 258 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 LINC00242Q5T6M2 205 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 Q8IZM0 81 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 CDC42SE2Q9NRR3 84 aa13.6□□□□□ -0.23
SHANK3-203ENST00000445220 Q8N814 137 aa13.59□□□□□ -0.23
SHANK3-203ENST00000445220 SORL1Q92673 2214 aa13.59□□□□□ -0.23
SHANK3-203ENST00000445220 PRO0628Q9UI54 55 aa13.59□□□□□ -0.23
SHANK3-203ENST00000445220 ANKRD11Q6UB99 2663 aaPredicted RBP13.59□□□□□ -0.23
SHANK3-203ENST00000445220 TLN1Q9Y490 2541 aaKnown RBP13.58□□□□□ -0.24
SHANK3-203ENST00000445220 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.24
SHANK3-203ENST00000445220 Q8N3U1 123 aa13.58□□□□□ -0.24
SHANK3-203ENST00000445220 SMIM1B2RUZ4 78 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 JMJD1CQ15652 2540 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 ADAMTSL4-AS1Q5T5F5 129 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 IGKV2-28A0A075B6P5 120 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 IGKV2D-28P01615 120 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 COX8CQ7Z4L0 72 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 KIR2DL5BQ8NHK3 375 aa13.57□□□□□ -0.24
SHANK3-203ENST00000445220 A0A087WYN8 130 aa13.56□□□□□ -0.24
SHANK3-203ENST00000445220 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
SHANK3-203ENST00000445220 LY6G6DO95868 133 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 BBC3Q96PG8 261 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-203ENST00000445220 RETNQ9HD89 108 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 HCFC1P51610 2035 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 IGLV2-18A0A075B6J9 118 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 WFDC10AQ9H1F0 79 aa13.55□□□□□ -0.24
SHANK3-203ENST00000445220 FLNBO75369 2602 aaKnown RBP13.52□□□□□ -0.24
SHANK3-203ENST00000445220 LRP4O75096 1905 aa13.52□□□□□ -0.25
SHANK3-203ENST00000445220 A0A087WZ39 114 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 LINC00208Q96KT6 92 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 ARHGAP32A7KAX9 2087 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 AMELXQ99217 191 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 LOC100131303A0A0U1RQF7 123 aa13.51□□□□□ -0.25
SHANK3-203ENST00000445220 IL17DQ8TAD2 202 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 LINC00846Q9NV44 126 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 TRBV7-6A0A0J9YX20 115 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 PSPHP1O15172 72 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 TMEM254Q8TBM7 123 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
SHANK3-203ENST00000445220 CRYGAP11844 174 aa13.49□□□□□ -0.25
SHANK3-203ENST00000445220 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
SHANK3-203ENST00000445220 CHCHD7Q9BUK0 85 aa13.48□□□□□ -0.25
SHANK3-203ENST00000445220 RPS28P62857 69 aaKnown RBP13.48□□□□□ -0.25
SHANK3-203ENST00000445220 ZNF580Q9UK33 172 aa13.47□□□□□ -0.25
SHANK3-203ENST00000445220 C10orf99Q6UWK7 81 aa13.47□□□□□ -0.25
SHANK3-203ENST00000445220 NANOS2P60321 138 aaKnown RBP13.46□□□□□ -0.25
SHANK3-203ENST00000445220 COX6A2Q02221 97 aa13.46□□□□□ -0.26
SHANK3-203ENST00000445220 TRBV10-3A0A0K0K1G6 114 aa13.45□□□□□ -0.26
SHANK3-203ENST00000445220 LELP1Q5T871 98 aa13.45□□□□□ -0.26
SHANK3-203ENST00000445220 CYSRT1A8MQ03 144 aa13.45□□□□□ -0.26
SHANK3-203ENST00000445220 PRM2P04554 102 aa13.45□□□□□ -0.26
SHANK3-203ENST00000445220 ESRGQ1W209 222 aa13.45□□□□□ -0.26
SHANK3-203ENST00000445220 SMCPP49901 116 aaPredicted RBP13.44□□□□□ -0.26
SHANK3-203ENST00000445220 PRRC2AP48634 2157 aaKnown RBP13.44□□□□□ -0.26
SHANK3-203ENST00000445220 Q6ZVQ6 151 aa13.43□□□□□ -0.26
SHANK3-203ENST00000445220 PRO0461Q9UI25 63 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1364.9 ms