RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 LINC00269Q8N2A0 174 aa13.46□□□□□ -0.26
APTR-204ENST00000440088 SNHG12Q9BXW3 62 aa13.46□□□□□ -0.26
APTR-204ENST00000440088 HIGD1BQ9P298 99 aa13.45□□□□□ -0.26
APTR-204ENST00000440088 SS18Q15532 418 aa13.44□□□□□ -0.26
APTR-204ENST00000440088 CLPSL2Q6UWE3 100 aa13.44□□□□□ -0.26
APTR-204ENST00000440088 CCL25O15444 150 aa13.44□□□□□ -0.26
APTR-204ENST00000440088 REG3AQ06141 175 aa13.43□□□□□ -0.26
APTR-204ENST00000440088 IGLL5B9A064 214 aa13.42□□□□□ -0.26
APTR-204ENST00000440088 EREGO14944 169 aa13.42□□□□□ -0.26
APTR-204ENST00000440088 WFDC10BQ8IUB3 73 aa13.42□□□□□ -0.26
APTR-204ENST00000440088 MEGF8Q7Z7M0 2845 aa13.42□□□□□ -0.26
APTR-204ENST00000440088 HINT1P49773 126 aaPredicted RBP13.42□□□□□ -0.26
APTR-204ENST00000440088 SCGB1D4Q6XE38 83 aa13.42□□□□□ -0.26
APTR-204ENST00000440088 IGHV3OR16-9A0A0B4J2B5 98 aa13.41□□□□□ -0.26
APTR-204ENST00000440088 SMIM1B2RUZ4 78 aa13.41□□□□□ -0.26
APTR-204ENST00000440088 BATFQ16520 125 aa13.41□□□□□ -0.26
APTR-204ENST00000440088 IGLV5-39A0A0G2JS06 123 aa13.4□□□□□ -0.26
APTR-204ENST00000440088 PRKDCP78527 4128 aaKnown RBP13.4□□□□□ -0.26
APTR-204ENST00000440088 IGHV3-30P01768 117 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 IGHV3-33P01772 117 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 IGHV3-30-5P0DP03 117 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 XCL1P47992 114 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 KLK12Q9UKR0 248 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 HSD52Q0P140 79 aa13.39□□□□□ -0.27
APTR-204ENST00000440088 LBHQ53QV2 105 aaPredicted RBP13.38□□□□□ -0.27
APTR-204ENST00000440088 PRR34Q9NV39 138 aa13.38□□□□□ -0.27
APTR-204ENST00000440088 A0A087WZ39 114 aa13.37□□□□□ -0.27
APTR-204ENST00000440088 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
APTR-204ENST00000440088 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
APTR-204ENST00000440088 CCL18P55774 89 aa13.36□□□□□ -0.27
APTR-204ENST00000440088 BVES-AS1Q5T3Y7 98 aa13.36□□□□□ -0.27
APTR-204ENST00000440088 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
APTR-204ENST00000440088 CD164L2Q6UWJ8 174 aa13.35□□□□□ -0.27
APTR-204ENST00000440088 C5orf38Q86SI9 138 aa13.35□□□□□ -0.27
APTR-204ENST00000440088 IGLV10-54A0A075B6I4 117 aa13.35□□□□□ -0.27
APTR-204ENST00000440088 CRPP02741 224 aa13.35□□□□□ -0.27
APTR-204ENST00000440088 LINC01556Q5JQF7 62 aa13.35□□□□□ -0.27
APTR-204ENST00000440088 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
APTR-204ENST00000440088 C10orf126Q8N4M7 172 aa13.34□□□□□ -0.27
APTR-204ENST00000440088 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
APTR-204ENST00000440088 LINC00588Q9Y4M8 146 aa13.34□□□□□ -0.27
APTR-204ENST00000440088 TAL2Q16559 108 aa13.33□□□□□ -0.28
APTR-204ENST00000440088 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
APTR-204ENST00000440088 NDUFA1O15239 70 aa13.32□□□□□ -0.28
APTR-204ENST00000440088 A0A0J9YXY3 114 aa13.31□□□□□ -0.28
APTR-204ENST00000440088 DNAH10OSP0CZ25 163 aa13.31□□□□□ -0.28
APTR-204ENST00000440088 LINC01561Q8N1V8 128 aa13.31□□□□□ -0.28
APTR-204ENST00000440088 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 COX7A2LO14548 114 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 GCSHP23434 173 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 SRSF9Q13242 221 aaKnown RBP eCLIP13.3□□□□□ -0.28
APTR-204ENST00000440088 COL5A1-AS1Q5SY13 56 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 MIAQ16674 131 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 CEND1Q8N111 149 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 COX7B2Q8TF08 81 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 Q9H8V8 135 aa13.3□□□□□ -0.28
APTR-204ENST00000440088 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
APTR-204ENST00000440088 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
APTR-204ENST00000440088 TM2D2Q9BX73 214 aa13.29□□□□□ -0.28
APTR-204ENST00000440088 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
APTR-204ENST00000440088 TMEM238C9JI98 176 aa13.28□□□□□ -0.28
APTR-204ENST00000440088 FOXI1Q12951 378 aa13.28□□□□□ -0.28
APTR-204ENST00000440088 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.28
APTR-204ENST00000440088 UPK3BQ9BT76 320 aa13.27□□□□□ -0.28
APTR-204ENST00000440088 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
APTR-204ENST00000440088 MALP21145 153 aa13.27□□□□□ -0.29
APTR-204ENST00000440088 APLNQ9ULZ1 77 aa13.27□□□□□ -0.29
APTR-204ENST00000440088 FXYD2P54710 66 aa13.25□□□□□ -0.29
APTR-204ENST00000440088 HERV-K104P63124 156 aa13.25□□□□□ -0.29
APTR-204ENST00000440088 KLK5Q9Y337 293 aaPredicted RBP13.25□□□□□ -0.29
APTR-204ENST00000440088 A6NDN8 102 aa13.25□□□□□ -0.29
APTR-204ENST00000440088 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
APTR-204ENST00000440088 PRSS2P07478 247 aa13.23□□□□□ -0.29
APTR-204ENST00000440088 C6orf226Q5I0X4 101 aa13.23□□□□□ -0.29
APTR-204ENST00000440088 Q8IZM0 81 aa13.23□□□□□ -0.29
APTR-204ENST00000440088 LITAFQ99732 161 aa13.23□□□□□ -0.29
APTR-204ENST00000440088 TIMM17BO60830 172 aa13.23□□□□□ -0.29
APTR-204ENST00000440088 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
APTR-204ENST00000440088 K7EP13 123 aa13.22□□□□□ -0.29
APTR-204ENST00000440088 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
APTR-204ENST00000440088 APOMO95445 188 aa13.22□□□□□ -0.29
APTR-204ENST00000440088 C1orf43Q9BWL3 253 aa13.21□□□□□ -0.29
APTR-204ENST00000440088 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
APTR-204ENST00000440088 CSMD3Q7Z407 3707 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 Q6ZVH6 145 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 SPANXDQ9BXN6 97 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
APTR-204ENST00000440088 FBN3Q75N90 2809 aa13.19□□□□□ -0.3
APTR-204ENST00000440088 TMEM238LA0A1B0GVL6 79 aa13.19□□□□□ -0.3
APTR-204ENST00000440088 A6NJY4 79 aa13.19□□□□□ -0.3
APTR-204ENST00000440088 UBE2DNLQ8IWF7 75 aa13.19□□□□□ -0.3
APTR-204ENST00000440088 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
APTR-204ENST00000440088 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
APTR-204ENST00000440088 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
APTR-204ENST00000440088 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
APTR-204ENST00000440088 KIAA0087Q14695 138 aa13.18□□□□□ -0.3
APTR-204ENST00000440088 IGKV2D-24A0A075B6R9 120 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms