RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
TTC3-209ENST00000438055 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
TTC3-209ENST00000438055 LINC00158P58513 81 aa11.94□□□□□ -0.5
TTC3-209ENST00000438055 KRTAP1-3Q8IUG1 177 aa11.94□□□□□ -0.5
TTC3-209ENST00000438055 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
TTC3-209ENST00000438055 CDC42SE2Q9NRR3 84 aa11.94□□□□□ -0.5
TTC3-209ENST00000438055 SETXQ7Z333 2677 aaKnown RBP11.93□□□□□ -0.5
TTC3-209ENST00000438055 NBEAL2Q6ZNJ1 2754 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 COPS9Q8WXC6 57 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 A0A096LPF7 62 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 H7C423 109 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 GCN1Q92616 2671 aaKnown RBP11.93□□□□□ -0.5
TTC3-209ENST00000438055 ITPR2Q14571 2701 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 GAGE2EQ4V326 116 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 GAGE2DQ9UEU5 116 aa11.93□□□□□ -0.5
TTC3-209ENST00000438055 CRLF1O75462 422 aa11.92□□□□□ -0.5
TTC3-209ENST00000438055 C5orf38Q86SI9 138 aa11.92□□□□□ -0.5
TTC3-209ENST00000438055 ANAPC13Q9BS18 74 aa11.92□□□□□ -0.5
TTC3-209ENST00000438055 HELZ2Q9BYK8 2649 aaKnown RBP11.92□□□□□ -0.5
TTC3-209ENST00000438055 CMC4P56277 68 aaPredicted RBP11.92□□□□□ -0.5
TTC3-209ENST00000438055 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
TTC3-209ENST00000438055 PFN2P35080 140 aa11.91□□□□□ -0.5
TTC3-209ENST00000438055 TIMM17BO60830 172 aa11.91□□□□□ -0.5
TTC3-209ENST00000438055 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
TTC3-209ENST00000438055 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.51
TTC3-209ENST00000438055 LST1O00453 97 aa11.9□□□□□ -0.51
TTC3-209ENST00000438055 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.51
TTC3-209ENST00000438055 TTC32Q5I0X7 151 aa11.89□□□□□ -0.51
TTC3-209ENST00000438055 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
TTC3-209ENST00000438055 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 CRPP02741 224 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 MIR7-3HGQ8N6C7 128 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 H3BT86 120 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 CLUHP3Q96NS8 147 aa11.88□□□□□ -0.51
TTC3-209ENST00000438055 COX7B2Q8TF08 81 aa11.87□□□□□ -0.51
TTC3-209ENST00000438055 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
TTC3-209ENST00000438055 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
TTC3-209ENST00000438055 HERV-K104P63124 156 aa11.86□□□□□ -0.51
TTC3-209ENST00000438055 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
TTC3-209ENST00000438055 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
TTC3-209ENST00000438055 XCL1P47992 114 aa11.86□□□□□ -0.51
TTC3-209ENST00000438055 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
TTC3-209ENST00000438055 SMR3AQ99954 134 aa11.85□□□□□ -0.51
TTC3-209ENST00000438055 PAX4O43316 350 aa11.85□□□□□ -0.51
TTC3-209ENST00000438055 C6orf226Q5I0X4 101 aa11.85□□□□□ -0.51
TTC3-209ENST00000438055 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
TTC3-209ENST00000438055 GYPEP15421 78 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 RNF183Q96D59 192 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 DEFB4AO15263 64 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
TTC3-209ENST00000438055 COX7A2LO14548 114 aa11.84□□□□□ -0.51
TTC3-209ENST00000438055 Q9HAA7 133 aa11.83□□□□□ -0.52
TTC3-209ENST00000438055 DNAL4O96015 105 aa11.83□□□□□ -0.52
TTC3-209ENST00000438055 F5H768 121 aa11.82□□□□□ -0.52
TTC3-209ENST00000438055 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
TTC3-209ENST00000438055 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
TTC3-209ENST00000438055 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
TTC3-209ENST00000438055 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
TTC3-209ENST00000438055 M0QXV9 152 aa11.81□□□□□ -0.52
TTC3-209ENST00000438055 FHL2Q14192 279 aa11.81□□□□□ -0.52
TTC3-209ENST00000438055 HTN3P15516 51 aa11.8□□□□□ -0.52
TTC3-209ENST00000438055 TRAV13-2A0A0B4J235 113 aa11.79□□□□□ -0.52
TTC3-209ENST00000438055 LINC00482Q8N8I6 264 aa11.79□□□□□ -0.52
TTC3-209ENST00000438055 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
TTC3-209ENST00000438055 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.52
TTC3-209ENST00000438055 SS18Q15532 418 aa11.77□□□□□ -0.53
TTC3-209ENST00000438055 OVOL2Q9BRP0 275 aa11.76□□□□□ -0.53
TTC3-209ENST00000438055 HILS1P60008 231 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 CSNK1G2-AS1Q8NCQ2 148 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 ATP5G1P05496 136 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 ATRQ13535 2644 aa11.75□□□□□ -0.53
TTC3-209ENST00000438055 LINC00337Q8N6G1 96 aa11.74□□□□□ -0.53
TTC3-209ENST00000438055 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
TTC3-209ENST00000438055 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
TTC3-209ENST00000438055 CCL18P55774 89 aa11.74□□□□□ -0.53
TTC3-209ENST00000438055 FAM218AQ96MZ4 157 aa11.74□□□□□ -0.53
TTC3-209ENST00000438055 J3QKU1 62 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 NDUFV3P56181 108 aaKnown RBP11.73□□□□□ -0.53
TTC3-209ENST00000438055 FAM222AQ5U5X8 452 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 B5MCH6 92 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 CITED1Q99966 193 aa11.73□□□□□ -0.53
TTC3-209ENST00000438055 ANGP03950 147 aaKnown RBP11.72□□□□□ -0.53
TTC3-209ENST00000438055 MALP21145 153 aa11.72□□□□□ -0.53
TTC3-209ENST00000438055 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
TTC3-209ENST00000438055 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
TTC3-209ENST00000438055 PRO0255Q9UI72 69 aa11.71□□□□□ -0.53
TTC3-209ENST00000438055 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.54
TTC3-209ENST00000438055 TENM4Q6N022 2769 aa11.71□□□□□ -0.54
TTC3-209ENST00000438055 TRACP01848 142 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms