RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 NTM-AS1Q6ZSK4 140 aa8.24□□□□□ -1.09
HMGCS1-202ENST00000433297 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 C18orf65Q6ZTR6 163 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 C19orf84I3L1E1 186 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 TMEM258P61165 79 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 C10orf105Q8TEF2 133 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 MUC6Q6W4X9 2439 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 F5H768 121 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
HMGCS1-202ENST00000433297 OXTP01178 125 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 Q6JHZ5 121 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 COX7B2Q8TF08 81 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 PF4P02776 101 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 PRORYQ9H606 182 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 IGHV4-30-2A0A087WSY4 118 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 CCL18P55774 89 aa8.22□□□□□ -1.09
HMGCS1-202ENST00000433297 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.09
HMGCS1-202ENST00000433297 WNK1Q9H4A3 2382 aa8.21□□□□□ -1.09
HMGCS1-202ENST00000433297 MSMBP08118 114 aa8.21□□□□□ -1.09
HMGCS1-202ENST00000433297 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.1
HMGCS1-202ENST00000433297 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 INSP01308 110 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 H0YGX0 51 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 GHRHP01286 108 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 Q6ZTI0 123 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 DYNLRB2Q8TF09 96 aa8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
HMGCS1-202ENST00000433297 FHL2Q14192 279 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 MAPK1IP1LQ8NDC0 245 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 C20orf197Q8N268 126 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 CCL19Q99731 98 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 ORMDL1Q9P0S3 153 aa8.19□□□□□ -1.1
HMGCS1-202ENST00000433297 K7EQD1 137 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 MAP6D1Q9H9H5 199 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 NCOR2Q9Y618 2525 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
HMGCS1-202ENST00000433297 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
HMGCS1-202ENST00000433297 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
HMGCS1-202ENST00000433297 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
HMGCS1-202ENST00000433297 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
HMGCS1-202ENST00000433297 TRAV25A0A0B4J276 109 aa8.15□□□□□ -1.1
HMGCS1-202ENST00000433297 STHQ8IWL8 128 aa8.15□□□□□ -1.1
HMGCS1-202ENST00000433297 CCKP06307 115 aa8.15□□□□□ -1.11
HMGCS1-202ENST00000433297 CHD8Q9HCK8 2581 aa8.14□□□□□ -1.11
HMGCS1-202ENST00000433297 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
HMGCS1-202ENST00000433297 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
HMGCS1-202ENST00000433297 UCNP55089 124 aa8.14□□□□□ -1.11
HMGCS1-202ENST00000433297 USP9XQ93008 2570 aaPredicted RBP8.14□□□□□ -1.11
HMGCS1-202ENST00000433297 JMJD1CQ15652 2540 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 B4DSR2 109 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 Q5XG85 94 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
HMGCS1-202ENST00000433297 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 CLPSL2Q6UWE3 100 aa8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 POLQO75417 2590 aa8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 XCL1P47992 114 aa8.12□□□□□ -1.11
HMGCS1-202ENST00000433297 SS18Q15532 418 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 S100A7L2Q5SY68 101 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 UBL5Q9BZL1 73 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 ITPR1Q14643 2758 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 IBA57-AS1B1ANH7 110 aa8.11□□□□□ -1.11
HMGCS1-202ENST00000433297 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 GNLYP22749 145 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 TLN2Q9Y4G6 2542 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 HAMPP81172 84 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 TMEM86BQ8N661 226 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 PTPN13Q12923 2485 aa8.1□□□□□ -1.11
HMGCS1-202ENST00000433297 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 CHD6Q8TD26 2715 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 JMJD7-PLA2G4BH0Y9G9 81 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 NBL1P41271 181 aa8.09□□□□□ -1.11
HMGCS1-202ENST00000433297 A8MTW9 85 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 Q8N814 137 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 ZNF702PQ9H963 129 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 NDUFC2O95298 119 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 ODF3L2Q3SX64 289 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 TMEM256-PLSCR3K7ERE1 68 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 WIPF1O43516 503 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 LAMTOR3Q9UHA4 124 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 CENPEQ02224 2701 aa8.08□□□□□ -1.12
HMGCS1-202ENST00000433297 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-202ENST00000433297 MXRA5Q9NR99 2828 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms