RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
NUP50-208ENST00000430547 LOC107984640A0A0U1RRK4 108 aa11.09□□□□□ -0.63
NUP50-208ENST00000430547 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
NUP50-208ENST00000430547 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
NUP50-208ENST00000430547 TGIF2-C20orf24A0A0A6YYL0 155 aa11.08□□□□□ -0.64
NUP50-208ENST00000430547 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
NUP50-208ENST00000430547 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
NUP50-208ENST00000430547 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
NUP50-208ENST00000430547 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
NUP50-208ENST00000430547 TMEM218A2RU14 115 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 Q8N8P6 123 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 PKHD1L1Q86WI1 4243 aa11.07□□□□□ -0.64
NUP50-208ENST00000430547 IGHV3OR16-9A0A0B4J2B5 98 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 Q6ZN92 141 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
NUP50-208ENST00000430547 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
NUP50-208ENST00000430547 IFITM2Q01629 132 aa11.05□□□□□ -0.64
NUP50-208ENST00000430547 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
NUP50-208ENST00000430547 C2orf66Q6UXQ4 117 aa11.05□□□□□ -0.64
NUP50-208ENST00000430547 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
NUP50-208ENST00000430547 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
NUP50-208ENST00000430547 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
NUP50-208ENST00000430547 K7EMI3 77 aa11.04□□□□□ -0.64
NUP50-208ENST00000430547 S100PP25815 95 aa11.04□□□□□ -0.64
NUP50-208ENST00000430547 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
NUP50-208ENST00000430547 F8WDY8 70 aa11.03□□□□□ -0.64
NUP50-208ENST00000430547 NDUFA1O15239 70 aa11.03□□□□□ -0.64
NUP50-208ENST00000430547 PRR3P79522 188 aaKnown RBP11.03□□□□□ -0.64
NUP50-208ENST00000430547 SEC11CQ9BY50 192 aa11.03□□□□□ -0.64
NUP50-208ENST00000430547 G0S2P27469 103 aa11.02□□□□□ -0.65
NUP50-208ENST00000430547 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
NUP50-208ENST00000430547 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
NUP50-208ENST00000430547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
NUP50-208ENST00000430547 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
NUP50-208ENST00000430547 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
NUP50-208ENST00000430547 VCX2Q9H322 139 aa11.01□□□□□ -0.65
NUP50-208ENST00000430547 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
NUP50-208ENST00000430547 A0A087WZ39 114 aa11□□□□□ -0.65
NUP50-208ENST00000430547 A0A0J9YXV3 536 aa11□□□□□ -0.65
NUP50-208ENST00000430547 KIAA1644Q3SXP7 199 aa11□□□□□ -0.65
NUP50-208ENST00000430547 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
NUP50-208ENST00000430547 NPSP0C0P6 89 aa10.99□□□□□ -0.65
NUP50-208ENST00000430547 UBE2D1P51668 147 aa10.99□□□□□ -0.65
NUP50-208ENST00000430547 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
NUP50-208ENST00000430547 Q6ZRP5 223 aa10.97□□□□□ -0.65
NUP50-208ENST00000430547 COX19Q49B96 90 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.65
NUP50-208ENST00000430547 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 AMELXQ99217 191 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.65
NUP50-208ENST00000430547 A0A1W2PNN7 141 aa10.95□□□□□ -0.66
NUP50-208ENST00000430547 IGIPA6NJ69 53 aa10.95□□□□□ -0.66
NUP50-208ENST00000430547 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
NUP50-208ENST00000430547 LINC01561Q8N1V8 128 aa10.95□□□□□ -0.66
NUP50-208ENST00000430547 PRSS2P07478 247 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 SEC11AP67812 179 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 RHEBQ15382 184 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 TOMM6Q96B49 74 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 PACRGQ96M98 296 aaPredicted RBP10.94□□□□□ -0.66
NUP50-208ENST00000430547 TIMM17AQ99595 171 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
NUP50-208ENST00000430547 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
NUP50-208ENST00000430547 MT-ND6P03923 174 aa10.93□□□□□ -0.66
NUP50-208ENST00000430547 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 HERVK_113P63121 156 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 KIAA0087Q14695 138 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
NUP50-208ENST00000430547 TOMM7Q9P0U1 55 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
NUP50-208ENST00000430547 CKS1BP61024 79 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 ERASQ7Z444 233 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 FAM19A3Q7Z5A8 133 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 ALKBH7Q9BT30 221 aaPredicted RBP10.91□□□□□ -0.66
NUP50-208ENST00000430547 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
NUP50-208ENST00000430547 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
NUP50-208ENST00000430547 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
NUP50-208ENST00000430547 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.66
NUP50-208ENST00000430547 REG3GQ6UW15 175 aa10.9□□□□□ -0.66
NUP50-208ENST00000430547 PHF5AQ7RTV0 110 aaKnown RBP10.9□□□□□ -0.66
NUP50-208ENST00000430547 MT1HL1P0DM35 61 aa10.89□□□□□ -0.67
NUP50-208ENST00000430547 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
NUP50-208ENST00000430547 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
NUP50-208ENST00000430547 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
NUP50-208ENST00000430547 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms