RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 Q6ZUT4 128 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 C3orf56Q8N813 242 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 C11orf72Q8NBR9 251 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 FAM104AQ969W3 186 aa6.3□□□□□ -1.4
GABPB1-205ENST00000429662 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
GABPB1-205ENST00000429662 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 IGHV3-64A0A075B6Q5 118 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
GABPB1-205ENST00000429662 H3BT86 120 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 NDUFA1O15239 70 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 PRSS2P07478 247 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
GABPB1-205ENST00000429662 HTN1P15515 57 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 CKS1BP61024 79 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 SFTA2Q6UW10 78 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
GABPB1-205ENST00000429662 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
GABPB1-205ENST00000429662 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
GABPB1-205ENST00000429662 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
GABPB1-205ENST00000429662 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
GABPB1-205ENST00000429662 DNAH1Q9P2D7 4330 aa6.28□□□□□ -1.4
GABPB1-205ENST00000429662 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
GABPB1-205ENST00000429662 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-205ENST00000429662 PROK1P58294 105 aa6.27□□□□□ -1.41
GABPB1-205ENST00000429662 RPL36AP83881 106 aaKnown RBP6.27□□□□□ -1.41
GABPB1-205ENST00000429662 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
GABPB1-205ENST00000429662 RPL36ALQ969Q0 106 aaKnown RBP6.27□□□□□ -1.41
GABPB1-205ENST00000429662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-205ENST00000429662 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-205ENST00000429662 H7C2G1 150 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 H7C423 109 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 TRIAP1O43715 76 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 HERV-K104P63124 156 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 Q6ZSN1 163 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 STHQ8IWL8 128 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
GABPB1-205ENST00000429662 TRAV4A0A0B4J268 109 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 XGP55808 180 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
GABPB1-205ENST00000429662 Q6Q795 121 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 UBE2WQ96B02 151 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 TMEM101Q96IK0 257 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 ESM1Q9NQ30 184 aa6.25□□□□□ -1.41
GABPB1-205ENST00000429662 TRAV8-4A0A0B4J246 113 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 K7EQD1 137 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 LST1O00453 97 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 HILS1P60008 231 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 DEFB136Q30KP8 78 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 C2orf82Q6UX34 121 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 C18orf65Q6ZTR6 163 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
GABPB1-205ENST00000429662 FAM110AQ9BQ89 295 aa6.24□□□□□ -1.41
GABPB1-205ENST00000429662 FAM240AA0A1B0GVK7 77 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 SNCGO76070 127 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 FHL3Q13643 280 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 DEFB121Q5J5C9 76 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 KHDC1LQ5JSQ8 128 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 CDKN2A-AS1Q9UH64 79 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 RYR1P21817 5038 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 HERC2O95714 4834 aa6.23□□□□□ -1.41
GABPB1-205ENST00000429662 IGHV3OR16-12A0A075B7B8 117 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 PF4P02776 101 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
GABPB1-205ENST00000429662 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 LINC00308Q8TCZ7 52 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 LYSTQ99698 3801 aa6.22□□□□□ -1.41
GABPB1-205ENST00000429662 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 ACYP1P07311 99 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 GAGE2BQ13066 116 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 ODF3L2Q3SX64 289 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 GAGE2EQ4V326 116 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 C16orf74Q96GX8 76 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 CITED1Q99966 193 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 Q9H8V8 135 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 XCL2Q9UBD3 114 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.41
GABPB1-205ENST00000429662 CCL24O00175 119 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 COX7A2LO14548 114 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 UBE2L6O14933 153 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 Q6ZSV7 163 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 TMEM243Q9BU79 118 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 TENM2Q9NT68 2774 aa6.2□□□□□ -1.42
GABPB1-205ENST00000429662 TRBV6-4A0A1B0GX49 114 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 TRACP01848 142 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 COX6A2Q02221 97 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 OVOL2Q9BRP0 275 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms