RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 LEPROTO15243 131 aa12.29□□□□□ -0.44
AC055811.2-201ENST00000427497 SNHG12Q9BXW3 62 aa12.29□□□□□ -0.44
AC055811.2-201ENST00000427497 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
AC055811.2-201ENST00000427497 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
AC055811.2-201ENST00000427497 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
AC055811.2-201ENST00000427497 M0R143 59 aa12.28□□□□□ -0.44
AC055811.2-201ENST00000427497 HIGD1BQ9P298 99 aa12.28□□□□□ -0.44
AC055811.2-201ENST00000427497 J3QQQ9 107 aa12.27□□□□□ -0.45
AC055811.2-201ENST00000427497 EREGO14944 169 aa12.27□□□□□ -0.45
AC055811.2-201ENST00000427497 H3BRM9 83 aa12.26□□□□□ -0.45
AC055811.2-201ENST00000427497 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
AC055811.2-201ENST00000427497 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
AC055811.2-201ENST00000427497 Q8N3U1 123 aa12.26□□□□□ -0.45
AC055811.2-201ENST00000427497 IGHV3-64A0A075B6Q5 118 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
AC055811.2-201ENST00000427497 ESRGQ1W209 222 aa12.24□□□□□ -0.45
AC055811.2-201ENST00000427497 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
AC055811.2-201ENST00000427497 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
AC055811.2-201ENST00000427497 IGKV3OR2-268A0A0C4DH90 116 aa12.23□□□□□ -0.45
AC055811.2-201ENST00000427497 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
AC055811.2-201ENST00000427497 LGALS3P17931 250 aaKnown RBP12.23□□□□□ -0.45
AC055811.2-201ENST00000427497 CCL25O15444 150 aa12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 HINT1P49773 126 aaPredicted RBP12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 IGHV3OR16-9A0A0B4J2B5 98 aa12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 SMIM1B2RUZ4 78 aa12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 LBHQ53QV2 105 aaPredicted RBP12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 LINC00269Q8N2A0 174 aa12.22□□□□□ -0.45
AC055811.2-201ENST00000427497 HSD52Q0P140 79 aa12.21□□□□□ -0.45
AC055811.2-201ENST00000427497 SS18Q15532 418 aa12.2□□□□□ -0.46
AC055811.2-201ENST00000427497 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
AC055811.2-201ENST00000427497 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
AC055811.2-201ENST00000427497 ALMS1Q8TCU4 4167 aa12.2□□□□□ -0.46
AC055811.2-201ENST00000427497 NUPR2A6NF83 97 aa12.19□□□□□ -0.46
AC055811.2-201ENST00000427497 REG3AQ06141 175 aa12.19□□□□□ -0.46
AC055811.2-201ENST00000427497 CLPSL2Q6UWE3 100 aa12.19□□□□□ -0.46
AC055811.2-201ENST00000427497 BATFQ16520 125 aa12.19□□□□□ -0.46
AC055811.2-201ENST00000427497 PRR34Q9NV39 138 aa12.19□□□□□ -0.46
AC055811.2-201ENST00000427497 A0A087WZ39 114 aa12.17□□□□□ -0.46
AC055811.2-201ENST00000427497 SCGB1D4Q6XE38 83 aa12.17□□□□□ -0.46
AC055811.2-201ENST00000427497 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
AC055811.2-201ENST00000427497 TAL2Q16559 108 aa12.16□□□□□ -0.46
AC055811.2-201ENST00000427497 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
AC055811.2-201ENST00000427497 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
AC055811.2-201ENST00000427497 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
AC055811.2-201ENST00000427497 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
AC055811.2-201ENST00000427497 EPPK1P58107 5090 aaKnown RBP12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 IGLL5B9A064 214 aa12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 XCL1P47992 114 aa12.15□□□□□ -0.46
AC055811.2-201ENST00000427497 CD164L2Q6UWJ8 174 aa12.14□□□□□ -0.47
AC055811.2-201ENST00000427497 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
AC055811.2-201ENST00000427497 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
AC055811.2-201ENST00000427497 NDUFA1O15239 70 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 LINC01561Q8N1V8 128 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 COL5A1-AS1Q5SY13 56 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
AC055811.2-201ENST00000427497 LY6G6CO95867 125 aa12.12□□□□□ -0.47
AC055811.2-201ENST00000427497 CEND1Q8N111 149 aa12.12□□□□□ -0.47
AC055811.2-201ENST00000427497 HIST1H4GQ99525 98 aa12.12□□□□□ -0.47
AC055811.2-201ENST00000427497 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
AC055811.2-201ENST00000427497 IGLV10-54A0A075B6I4 117 aa12.11□□□□□ -0.47
AC055811.2-201ENST00000427497 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 GCSHP23434 173 aa12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 CCL18P55774 89 aa12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 FOXI1Q12951 378 aa12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 COX7B2Q8TF08 81 aa12.1□□□□□ -0.47
AC055811.2-201ENST00000427497 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
AC055811.2-201ENST00000427497 FXYD2P54710 66 aa12.09□□□□□ -0.47
AC055811.2-201ENST00000427497 UBE2WQ96B02 151 aa12.09□□□□□ -0.47
AC055811.2-201ENST00000427497 LITAFQ99732 161 aa12.09□□□□□ -0.47
AC055811.2-201ENST00000427497 Q9H8V8 135 aa12.09□□□□□ -0.47
AC055811.2-201ENST00000427497 COX7A2LO14548 114 aa12.08□□□□□ -0.48
AC055811.2-201ENST00000427497 CRPP02741 224 aa12.08□□□□□ -0.48
AC055811.2-201ENST00000427497 SRSF9Q13242 221 aaKnown RBP eCLIP12.08□□□□□ -0.48
AC055811.2-201ENST00000427497 MIAQ16674 131 aa12.08□□□□□ -0.48
AC055811.2-201ENST00000427497 UPK3BQ9BT76 320 aa12.07□□□□□ -0.48
AC055811.2-201ENST00000427497 TMEM238C9JI98 176 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 K7EP13 123 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 TIMM17BO60830 172 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 APLNQ9ULZ1 77 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 HERV-K104P63124 156 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 KMT2AQ03164 3969 aa12.06□□□□□ -0.48
AC055811.2-201ENST00000427497 A6NDN8 102 aa12.05□□□□□ -0.48
AC055811.2-201ENST00000427497 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms