RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 TIRAPP58753 221 aa11.92□□□□□ -0.5
FN1-208ENST00000426059 PLEKHB2Q96CS7 222 aa11.92□□□□□ -0.5
FN1-208ENST00000426059 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
FN1-208ENST00000426059 LELP1Q5T871 98 aa11.91□□□□□ -0.5
FN1-208ENST00000426059 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
FN1-208ENST00000426059 SH2D6Q7Z4S9 175 aa11.91□□□□□ -0.5
FN1-208ENST00000426059 LEPROTO15243 131 aa11.9□□□□□ -0.5
FN1-208ENST00000426059 HERVK_113P63121 156 aa11.9□□□□□ -0.5
FN1-208ENST00000426059 H3BNG1 76 aa11.9□□□□□ -0.51
FN1-208ENST00000426059 SIVA1O15304 175 aa11.9□□□□□ -0.51
FN1-208ENST00000426059 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.51
FN1-208ENST00000426059 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.51
FN1-208ENST00000426059 MEGF8Q7Z7M0 2845 aa11.89□□□□□ -0.51
FN1-208ENST00000426059 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
FN1-208ENST00000426059 ANGP03950 147 aaKnown RBP11.89□□□□□ -0.51
FN1-208ENST00000426059 FAM19A3Q7Z5A8 133 aa11.89□□□□□ -0.51
FN1-208ENST00000426059 B9D2Q9BPU9 175 aa11.89□□□□□ -0.51
FN1-208ENST00000426059 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
FN1-208ENST00000426059 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
FN1-208ENST00000426059 ESRGQ1W209 222 aa11.88□□□□□ -0.51
FN1-208ENST00000426059 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
FN1-208ENST00000426059 TRAV10A0A0B4J240 114 aa11.87□□□□□ -0.51
FN1-208ENST00000426059 SEC11AP67812 179 aa11.87□□□□□ -0.51
FN1-208ENST00000426059 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
FN1-208ENST00000426059 H3BRM9 83 aa11.86□□□□□ -0.51
FN1-208ENST00000426059 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
FN1-208ENST00000426059 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
FN1-208ENST00000426059 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
FN1-208ENST00000426059 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
FN1-208ENST00000426059 HIGD1BQ9P298 99 aa11.86□□□□□ -0.51
FN1-208ENST00000426059 IGLV10-54A0A075B6I4 117 aa11.85□□□□□ -0.51
FN1-208ENST00000426059 K7ERU9 68 aa11.85□□□□□ -0.51
FN1-208ENST00000426059 XCL1P47992 114 aa11.85□□□□□ -0.51
FN1-208ENST00000426059 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
FN1-208ENST00000426059 HSD52Q0P140 79 aa11.84□□□□□ -0.51
FN1-208ENST00000426059 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
FN1-208ENST00000426059 REG3AQ06141 175 aa11.84□□□□□ -0.51
FN1-208ENST00000426059 KLK12Q9UKR0 248 aa11.84□□□□□ -0.51
FN1-208ENST00000426059 IGLL5B9A064 214 aa11.83□□□□□ -0.52
FN1-208ENST00000426059 GCSHP23434 173 aa11.83□□□□□ -0.52
FN1-208ENST00000426059 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
FN1-208ENST00000426059 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
FN1-208ENST00000426059 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
FN1-208ENST00000426059 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
FN1-208ENST00000426059 SS18Q15532 418 aa11.82□□□□□ -0.52
FN1-208ENST00000426059 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
FN1-208ENST00000426059 FXYD2P54710 66 aa11.81□□□□□ -0.52
FN1-208ENST00000426059 GAGE10A6NGK3 116 aa11.81□□□□□ -0.52
FN1-208ENST00000426059 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
FN1-208ENST00000426059 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
FN1-208ENST00000426059 ZFAND6Q6FIF0 208 aa11.79□□□□□ -0.52
FN1-208ENST00000426059 CEND1Q8N111 149 aa11.79□□□□□ -0.52
FN1-208ENST00000426059 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
FN1-208ENST00000426059 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
FN1-208ENST00000426059 SRSF9Q13242 221 aaKnown RBP eCLIP11.78□□□□□ -0.52
FN1-208ENST00000426059 GTF2H5Q6ZYL4 71 aa11.78□□□□□ -0.52
FN1-208ENST00000426059 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
FN1-208ENST00000426059 LYSTQ99698 3801 aa11.77□□□□□ -0.53
FN1-208ENST00000426059 A0A087WZ39 114 aa11.77□□□□□ -0.53
FN1-208ENST00000426059 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
FN1-208ENST00000426059 Q9H8V8 135 aa11.77□□□□□ -0.53
FN1-208ENST00000426059 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
FN1-208ENST00000426059 A6NDN8 102 aa11.76□□□□□ -0.53
FN1-208ENST00000426059 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
FN1-208ENST00000426059 C9orf118A6NHY6 69 aa11.76□□□□□ -0.53
FN1-208ENST00000426059 KRTAP21-3Q3LHN1 58 aa11.76□□□□□ -0.53
FN1-208ENST00000426059 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
FN1-208ENST00000426059 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
FN1-208ENST00000426059 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
FN1-208ENST00000426059 A0A0U1RRA0 63 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 ADAMTSL4-AS1Q5T5F5 129 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 H3BUT2 72 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 K7ERJ3 54 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 NDUFA1O15239 70 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 TAL2Q16559 108 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 COX7B2Q8TF08 81 aa11.74□□□□□ -0.53
FN1-208ENST00000426059 DAND5Q8N907 189 aa11.73□□□□□ -0.53
FN1-208ENST00000426059 NHP2Q9NX24 153 aaKnown RBP11.73□□□□□ -0.53
FN1-208ENST00000426059 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
FN1-208ENST00000426059 K7EP34 96 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 CRPP02741 224 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 LITAFQ99732 161 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
FN1-208ENST00000426059 NPC2P61916 151 aa11.72□□□□□ -0.53
FN1-208ENST00000426059 TMEM238C9JI98 176 aa11.71□□□□□ -0.53
FN1-208ENST00000426059 FOXI1Q12951 378 aa11.71□□□□□ -0.53
FN1-208ENST00000426059 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
FN1-208ENST00000426059 SPANXB1Q9NS25 103 aaPredicted RBP11.71□□□□□ -0.53
FN1-208ENST00000426059 COX7A2LO14548 114 aa11.71□□□□□ -0.54
FN1-208ENST00000426059 CCL18P55774 89 aa11.7□□□□□ -0.54
FN1-208ENST00000426059 PRSS2P07478 247 aa11.69□□□□□ -0.54
FN1-208ENST00000426059 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
FN1-208ENST00000426059 MALP21145 153 aa11.69□□□□□ -0.54
FN1-208ENST00000426059 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
FN1-208ENST00000426059 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
FN1-208ENST00000426059 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
FN1-208ENST00000426059 C2orf82Q6UX34 121 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms