RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
MSH5-206ENST00000423982 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
MSH5-206ENST00000423982 LINC00308Q8TCZ7 52 aa10.3□□□□□ -0.76
MSH5-206ENST00000423982 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
MSH5-206ENST00000423982 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
MSH5-206ENST00000423982 NDUFA1O15239 70 aa10.28□□□□□ -0.76
MSH5-206ENST00000423982 DGAT2L7PQ6IED9 249 aa10.28□□□□□ -0.76
MSH5-206ENST00000423982 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
MSH5-206ENST00000423982 TRRAPQ9Y4A5 3859 aa10.28□□□□□ -0.76
MSH5-206ENST00000423982 LINC01587Q99440 93 aa10.28□□□□□ -0.76
MSH5-206ENST00000423982 DEFB121Q5J5C9 76 aa10.27□□□□□ -0.76
MSH5-206ENST00000423982 STAB1Q9NY15 2570 aa10.27□□□□□ -0.76
MSH5-206ENST00000423982 TRAV13-1A0A0B4J241 112 aa10.27□□□□□ -0.77
MSH5-206ENST00000423982 LINC00242Q5T6M2 205 aa10.27□□□□□ -0.77
MSH5-206ENST00000423982 C11orf72Q8NBR9 251 aa10.27□□□□□ -0.77
MSH5-206ENST00000423982 ZNF415Q09FC8 603 aa10.26□□□□□ -0.77
MSH5-206ENST00000423982 COL6A5A8TX70 2615 aa10.26□□□□□ -0.77
MSH5-206ENST00000423982 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
MSH5-206ENST00000423982 RNF152Q8N8N0 203 aa10.26□□□□□ -0.77
MSH5-206ENST00000423982 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 FAM240AA0A1B0GVK7 77 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 TIMM17BO60830 172 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 FAM218AQ96MZ4 157 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 TMEM89A2RUT3 159 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 HERV-K104P63124 156 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
MSH5-206ENST00000423982 COX7A2LO14548 114 aa10.24□□□□□ -0.77
MSH5-206ENST00000423982 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
MSH5-206ENST00000423982 DAZ2Q13117 558 aaKnown RBP10.24□□□□□ -0.77
MSH5-206ENST00000423982 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
MSH5-206ENST00000423982 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
MSH5-206ENST00000423982 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 TIRAPP58753 221 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 PRIMA1Q86XR5 153 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
MSH5-206ENST00000423982 MRPL23Q16540 153 aaKnown RBP10.22□□□□□ -0.77
MSH5-206ENST00000423982 Q9HAA7 133 aa10.22□□□□□ -0.77
MSH5-206ENST00000423982 MAP6D1Q9H9H5 199 aa10.22□□□□□ -0.77
MSH5-206ENST00000423982 NTM-AS1Q6ZSK4 140 aa10.21□□□□□ -0.77
MSH5-206ENST00000423982 KRTAP10-3P60369 221 aa10.21□□□□□ -0.78
MSH5-206ENST00000423982 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.78
MSH5-206ENST00000423982 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 HERVK_113P63121 156 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 RS1O15537 224 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 C4orf3Q8WVX3 66 aa10.2□□□□□ -0.78
MSH5-206ENST00000423982 A8MTW9 85 aa10.19□□□□□ -0.78
MSH5-206ENST00000423982 DNAJC30Q96LL9 226 aa10.19□□□□□ -0.78
MSH5-206ENST00000423982 F5H768 121 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
MSH5-206ENST00000423982 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 IGKV3OR2-268A0A0C4DH90 116 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 CCL24O00175 119 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 INSP01308 110 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 Q6ZTI0 123 aa10.17□□□□□ -0.78
MSH5-206ENST00000423982 GAGE2AQ6NT46 116 aa10.16□□□□□ -0.78
MSH5-206ENST00000423982 DYNLRB2Q8TF09 96 aa10.15□□□□□ -0.78
MSH5-206ENST00000423982 C1orf158Q8N1D5 194 aa10.15□□□□□ -0.78
MSH5-206ENST00000423982 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
MSH5-206ENST00000423982 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
MSH5-206ENST00000423982 PKD1L1Q8TDX9 2849 aa10.15□□□□□ -0.79
MSH5-206ENST00000423982 TOMM7Q9P0U1 55 aa10.14□□□□□ -0.79
MSH5-206ENST00000423982 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 TRACP01848 142 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 ACYP1P07311 99 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 LINC00643Q86TS7 51 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 KLK5Q9Y337 293 aaPredicted RBP10.13□□□□□ -0.79
MSH5-206ENST00000423982 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 A0A087WYN8 130 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
MSH5-206ENST00000423982 K7EQD1 137 aa10.12□□□□□ -0.79
MSH5-206ENST00000423982 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
MSH5-206ENST00000423982 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
MSH5-206ENST00000423982 ATP5G1P05496 136 aa10.11□□□□□ -0.79
MSH5-206ENST00000423982 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
MSH5-206ENST00000423982 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
MSH5-206ENST00000423982 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
MSH5-206ENST00000423982 PF4P02776 101 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 MALP21145 153 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
MSH5-206ENST00000423982 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
MSH5-206ENST00000423982 CRPP02741 224 aa10.09□□□□□ -0.79
MSH5-206ENST00000423982 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
MSH5-206ENST00000423982 STHQ8IWL8 128 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 252.1 ms