RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 A0A1W2PPM0 123 aa14.48□□□□□ -0.09
GPC1-202ENST00000420138 GTF2H5Q6ZYL4 71 aa14.48□□□□□ -0.09
GPC1-202ENST00000420138 TMEM101Q96IK0 257 aa14.48□□□□□ -0.09
GPC1-202ENST00000420138 B9D2Q9BPU9 175 aa14.48□□□□□ -0.09
GPC1-202ENST00000420138 NANOS2P60321 138 aaKnown RBP14.48□□□□□ -0.09
GPC1-202ENST00000420138 ICOSQ9Y6W8 199 aa14.48□□□□□ -0.09
GPC1-202ENST00000420138 IGHV3-64A0A075B6Q5 118 aa14.47□□□□□ -0.09
GPC1-202ENST00000420138 A0A1B0GWB2 263 aa14.47□□□□□ -0.09
GPC1-202ENST00000420138 LINC00242Q5T6M2 205 aa14.47□□□□□ -0.09
GPC1-202ENST00000420138 C11orf45Q8TAV5 145 aa14.47□□□□□ -0.09
GPC1-202ENST00000420138 IGLV5-45A0A087WSX0 123 aa14.46□□□□□ -0.09
GPC1-202ENST00000420138 TMEM238LA0A1B0GVL6 79 aa14.46□□□□□ -0.09
GPC1-202ENST00000420138 A6NJY4 79 aa14.46□□□□□ -0.09
GPC1-202ENST00000420138 TIRAPP58753 221 aa14.46□□□□□ -0.09
GPC1-202ENST00000420138 COX6A2Q02221 97 aa14.46□□□□□ -0.09
GPC1-202ENST00000420138 K7EP34 96 aa14.45□□□□□ -0.1
GPC1-202ENST00000420138 FABP2P12104 132 aa14.45□□□□□ -0.1
GPC1-202ENST00000420138 H3BNG1 76 aa14.45□□□□□ -0.1
GPC1-202ENST00000420138 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
GPC1-202ENST00000420138 GEMIN7Q9H840 131 aaKnown RBP14.45□□□□□ -0.1
GPC1-202ENST00000420138 TRAV13-1A0A0B4J241 112 aa14.44□□□□□ -0.1
GPC1-202ENST00000420138 IGHV1-58A0A0C4DH39 117 aa14.44□□□□□ -0.1
GPC1-202ENST00000420138 A0A1B0GUV1 79 aa14.43□□□□□ -0.1
GPC1-202ENST00000420138 IGLL5B9A064 214 aa14.43□□□□□ -0.1
GPC1-202ENST00000420138 SH2D6Q7Z4S9 175 aa14.43□□□□□ -0.1
GPC1-202ENST00000420138 RBX1P62877 108 aa14.43□□□□□ -0.1
GPC1-202ENST00000420138 CDKN2A-AS1Q9UH64 79 aa14.43□□□□□ -0.1
GPC1-202ENST00000420138 SPCS1Q9Y6A9 102 aa14.42□□□□□ -0.1
GPC1-202ENST00000420138 TRAV8-3A0A0A6YYJ7 113 aa14.41□□□□□ -0.1
GPC1-202ENST00000420138 IGHV3-30P01768 117 aa14.41□□□□□ -0.1
GPC1-202ENST00000420138 IGHV3-30-5P0DP03 117 aa14.41□□□□□ -0.1
GPC1-202ENST00000420138 TMEM262E9PQX1 116 aa14.41□□□□□ -0.1
GPC1-202ENST00000420138 DNAH9Q9NYC9 4486 aa14.4□□□□□ -0.1
GPC1-202ENST00000420138 HERVK_113P63121 156 aa14.4□□□□□ -0.1
GPC1-202ENST00000420138 LELP1Q5T871 98 aa14.4□□□□□ -0.1
GPC1-202ENST00000420138 DEFB131BA0A096LNP1 70 aa14.39□□□□□ -0.11
GPC1-202ENST00000420138 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
GPC1-202ENST00000420138 LYPD5Q6UWN5 251 aa14.39□□□□□ -0.11
GPC1-202ENST00000420138 Q8N3U1 123 aa14.38□□□□□ -0.11
GPC1-202ENST00000420138 C10orf126Q8N4M7 172 aa14.38□□□□□ -0.11
GPC1-202ENST00000420138 A0A0J9YXY3 114 aa14.38□□□□□ -0.11
GPC1-202ENST00000420138 COL7A1Q02388 2944 aa14.37□□□□□ -0.11
GPC1-202ENST00000420138 TMEM238C9JI98 176 aa14.36□□□□□ -0.11
GPC1-202ENST00000420138 NDUFA12Q9UI09 145 aa14.36□□□□□ -0.11
GPC1-202ENST00000420138 IGKV3OR2-268A0A0C4DH90 116 aa14.35□□□□□ -0.11
GPC1-202ENST00000420138 NHLRC4P0CG21 123 aaPredicted RBP14.35□□□□□ -0.11
GPC1-202ENST00000420138 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
GPC1-202ENST00000420138 IGLV5-39A0A0G2JS06 123 aa14.34□□□□□ -0.11
GPC1-202ENST00000420138 ZFAND6Q6FIF0 208 aa14.34□□□□□ -0.11
GPC1-202ENST00000420138 MEGF8Q7Z7M0 2845 aa14.33□□□□□ -0.11
GPC1-202ENST00000420138 SMIM1B2RUZ4 78 aa14.33□□□□□ -0.12
GPC1-202ENST00000420138 APOMO95445 188 aa14.33□□□□□ -0.12
GPC1-202ENST00000420138 PGPEP1Q9NXJ5 209 aa14.33□□□□□ -0.12
GPC1-202ENST00000420138 TRAV10A0A0B4J240 114 aa14.31□□□□□ -0.12
GPC1-202ENST00000420138 IGHV3OR16-9A0A0B4J2B5 98 aa14.31□□□□□ -0.12
GPC1-202ENST00000420138 CFC1BP0CG36 223 aa14.31□□□□□ -0.12
GPC1-202ENST00000420138 CFC1P0CG37 223 aa14.31□□□□□ -0.12
GPC1-202ENST00000420138 RPL24P83731 157 aaKnown RBP14.31□□□□□ -0.12
GPC1-202ENST00000420138 MUSTN1Q8IVN3 82 aa14.31□□□□□ -0.12
GPC1-202ENST00000420138 ESRGQ1W209 222 aa14.3□□□□□ -0.12
GPC1-202ENST00000420138 LINC00269Q8N2A0 174 aa14.3□□□□□ -0.12
GPC1-202ENST00000420138 LITAFQ99732 161 aa14.3□□□□□ -0.12
GPC1-202ENST00000420138 CLPSL2Q6UWE3 100 aa14.29□□□□□ -0.12
GPC1-202ENST00000420138 A4D1N5 150 aa14.28□□□□□ -0.12
GPC1-202ENST00000420138 NDUFA1O15239 70 aa14.28□□□□□ -0.12
GPC1-202ENST00000420138 TSPAN13O95857 204 aa14.28□□□□□ -0.12
GPC1-202ENST00000420138 ANGP03950 147 aaKnown RBP14.28□□□□□ -0.12
GPC1-202ENST00000420138 SPANXDQ9BXN6 97 aa14.28□□□□□ -0.12
GPC1-202ENST00000420138 SPANXCQ9NY87 97 aa14.28□□□□□ -0.12
GPC1-202ENST00000420138 TIMM17BO60830 172 aa14.27□□□□□ -0.13
GPC1-202ENST00000420138 WFDC10BQ8IUB3 73 aa14.27□□□□□ -0.13
GPC1-202ENST00000420138 REG3AQ06141 175 aa14.26□□□□□ -0.13
GPC1-202ENST00000420138 PRO1854Q9UHT4 67 aa14.26□□□□□ -0.13
GPC1-202ENST00000420138 A0A087WZ39 114 aa14.25□□□□□ -0.13
GPC1-202ENST00000420138 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.25□□□□□ -0.13
GPC1-202ENST00000420138 PRKDCP78527 4128 aaKnown RBP14.25□□□□□ -0.13
GPC1-202ENST00000420138 SS18Q15532 418 aa14.25□□□□□ -0.13
GPC1-202ENST00000420138 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
GPC1-202ENST00000420138 PRR34Q9NV39 138 aa14.25□□□□□ -0.13
GPC1-202ENST00000420138 A0A0B4J2C4 111 aa14.24□□□□□ -0.13
GPC1-202ENST00000420138 XCL1P47992 114 aa14.24□□□□□ -0.13
GPC1-202ENST00000420138 MIAQ16674 131 aa14.24□□□□□ -0.13
GPC1-202ENST00000420138 PRSS2P07478 247 aa14.23□□□□□ -0.13
GPC1-202ENST00000420138 C5orf38Q86SI9 138 aa14.23□□□□□ -0.13
GPC1-202ENST00000420138 OCIAD2Q56VL3 154 aa14.22□□□□□ -0.13
GPC1-202ENST00000420138 C15orf53Q8NAA6 179 aa14.22□□□□□ -0.13
GPC1-202ENST00000420138 Q9H8V8 135 aa14.22□□□□□ -0.13
GPC1-202ENST00000420138 KLK12Q9UKR0 248 aa14.22□□□□□ -0.13
GPC1-202ENST00000420138 IGHV3-33P01772 117 aa14.21□□□□□ -0.13
GPC1-202ENST00000420138 CIRBPQ14011 172 aaKnown RBP14.21□□□□□ -0.13
GPC1-202ENST00000420138 LYRM7Q5U5X0 104 aa14.21□□□□□ -0.13
GPC1-202ENST00000420138 ENHOQ6UWT2 76 aa14.21□□□□□ -0.13
GPC1-202ENST00000420138 H3BMG7 143 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
GPC1-202ENST00000420138 STAB2Q8WWQ8 2551 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 F8W1H4 67 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 IFITM1P13164 125 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
GPC1-202ENST00000420138 CHCHD10Q8WYQ3 142 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms