RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 PDCD11Q14690 1871 aaKnown RBP3.21□□□□□ -1.9
XIST-201ENST00000416330 MED12Q93074 2177 aa3.21□□□□□ -1.9
XIST-201ENST00000416330 SCN7AQ01118 1682 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 PI4KAP42356 2102 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 GBF1Q92538 1859 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 TRGV4A0A0C4DH28 118 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 UQCR11O14957 56 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 FXYD4P59646 89 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 C5orf56Q8N8D9 126 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 CYYR1Q96J86 154 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 WFDC6Q9BQY6 131 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 SPTBP11277 2137 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 DLEC1Q9Y238 1755 aa3.2□□□□□ -1.9
XIST-201ENST00000416330 ARFGEF3Q5TH69 2177 aa3.19□□□□□ -1.9
XIST-201ENST00000416330 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
XIST-201ENST00000416330 HCP5Q6MZN7 132 aa3.19□□□□□ -1.9
XIST-201ENST00000416330 LINC00322Q6ZN03 302 aaPredicted RBP3.19□□□□□ -1.9
XIST-201ENST00000416330 CEP170BQ9Y4F5 1589 aaPredicted RBP3.19□□□□□ -1.9
XIST-201ENST00000416330 SIPA1L3O60292 1781 aaPredicted RBP3.19□□□□□ -1.9
XIST-201ENST00000416330 ZNF137PP52743 207 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 ATXN8Q156A1 80 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 PRR9Q5T870 116 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 GDF5OSQ5U4N7 250 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 DEFB107AQ8IZN7 70 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 LAMC1P11047 1609 aa3.18□□□□□ -1.9
XIST-201ENST00000416330 SPAG17Q6Q759 2223 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 PREX1Q8TCU6 1659 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 RREB1Q92766 1687 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 ABCA4P78363 2273 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 ARFGEF1Q9Y6D6 1849 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 COL4A2P08572 1712 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 PIK3C2BO00750 1634 aa3.17□□□□□ -1.9
XIST-201ENST00000416330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
XIST-201ENST00000416330 SNRPGP15A8MWD9 76 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 INE1O15225 51 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 MGPP08493 103 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 DIP2AQ14689 1571 aa3.16□□□□□ -1.9
XIST-201ENST00000416330 BAZ2BQ9UIF8 2168 aaKnown RBP3.15□□□□□ -1.9
XIST-201ENST00000416330 A0A0D9SFI3 127 aa3.15□□□□□ -1.91
XIST-201ENST00000416330 COA5Q86WW8 74 aa3.15□□□□□ -1.91
XIST-201ENST00000416330 Q96NJ1 140 aa3.15□□□□□ -1.91
XIST-201ENST00000416330 LINC00846Q9NV44 126 aa3.15□□□□□ -1.91
XIST-201ENST00000416330 NKTRP30414 1462 aaKnown RBP3.15□□□□□ -1.91
XIST-201ENST00000416330 PRRC2BQ5JSZ5 2229 aaKnown RBP3.15□□□□□ -1.91
XIST-201ENST00000416330 CRYBG1Q9Y4K1 1723 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 LOC110117498A0A087WWA1 95 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 IFI6P09912 130 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 ZNF625Q96I27 306 aaPredicted RBP3.14□□□□□ -1.91
XIST-201ENST00000416330 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 TXNDC17Q9BRA2 123 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 A0A1B0GUL6 1792 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 ATP7BP35670 1465 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 TNRC6BQ9UPQ9 1833 aaKnown RBP3.14□□□□□ -1.91
XIST-201ENST00000416330 BRWD1Q9NSI6 2320 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 SHANK1Q9Y566 2161 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 SYCP2Q9BX26 1530 aa3.14□□□□□ -1.91
XIST-201ENST00000416330 ADAMTS9Q9P2N4 1935 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 PAPPAQ13219 1627 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 A0A1B0GUT8 65 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 HMGA1P17096 107 aaKnown RBP3.13□□□□□ -1.91
XIST-201ENST00000416330 MROH2AA6NES4 1674 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 TET1Q8NFU7 2136 aa3.13□□□□□ -1.91
XIST-201ENST00000416330 PRRC2AP48634 2157 aaKnown RBP3.12□□□□□ -1.91
XIST-201ENST00000416330 ATRXP46100 2492 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 TRGV2A0A075B6R0 118 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 TRGV1A0A0A0MS02 117 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 M0R2N4 97 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 IGKV4-1P06312 121 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 SPINK7P58062 85 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
XIST-201ENST00000416330 MYO7BQ6PIF6 2116 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 GPR179Q6PRD1 2367 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 LRRC7Q96NW7 1537 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 TRAV1-2A0A0B4J238 106 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 Q6ZRN7 208 aaPredicted RBP3.11□□□□□ -1.91
XIST-201ENST00000416330 LRP6O75581 1613 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 USP32Q8NFA0 1604 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 PCDH15Q96QU1 1955 aa3.11□□□□□ -1.91
XIST-201ENST00000416330 ADGRB2O60241 1585 aa3.1□□□□□ -1.91
XIST-201ENST00000416330 H0Y9P7 68 aa3.1□□□□□ -1.91
XIST-201ENST00000416330 COL4A1P02462 1669 aa3.1□□□□□ -1.91
XIST-201ENST00000416330 SHPRHQ149N8 1683 aa3.1□□□□□ -1.91
XIST-201ENST00000416330 ALS2Q96Q42 1657 aa3.1□□□□□ -1.91
XIST-201ENST00000416330 NESP48681 1621 aa3.09□□□□□ -1.91
XIST-201ENST00000416330 MDC1Q14676 2089 aaKnown RBP3.09□□□□□ -1.91
XIST-201ENST00000416330 LINC01549A6NIU2 74 aa3.09□□□□□ -1.91
XIST-201ENST00000416330 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
XIST-201ENST00000416330 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
XIST-201ENST00000416330 LOC285556D6RIA3 1793 aa3.09□□□□□ -1.91
XIST-201ENST00000416330 ZMYM4Q5VZL5 1548 aa3.09□□□□□ -1.92
XIST-201ENST00000416330 ALKQ9UM73 1620 aa3.08□□□□□ -1.92
XIST-201ENST00000416330 PLCH1Q4KWH8 1693 aa3.08□□□□□ -1.92
XIST-201ENST00000416330 DOCK10Q96BY6 2186 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 HCRTO43612 131 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 C10orf113Q5VZT2 155 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms