RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MIAQ16674 131 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 CEMP1Q6PRD7 247 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 C5orf38Q86SI9 138 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 MUSTN1Q8IVN3 82 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 RNF182Q8N6D2 247 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 Q8N9W7 124 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 WFDC11Q8NEX6 87 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 USMG5Q96IX5 58 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 ICOSQ9Y6W8 199 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 MALRD1Q5VYJ5 2156 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 MED13Q9UHV7 2174 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGHV1-58A0A0C4DH39 117 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 TEX49A0A1B0GTD5 131 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 E7EQL1 145 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 I3L3M4 83 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 BCE1O60756 84 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 APELAP0DMC3 54 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 COX7CP15954 63 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 C20orf203Q8NBC4 194 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 C16orf74Q96GX8 76 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 VSIG2Q96IQ7 327 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 TIMM21Q9BVV7 248 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM186AA6NE01 2351 aa2.42□□□□□ -2.02
HMGB3P23-201ENST00000414981 UNC80Q8N2C7 3258 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMEM256-PLSCR3K7ERE1 68 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 M0QY20 66 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 MGPP08493 103 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGHV3-30-3P0DP02 117 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 COX7A1P24310 79 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 TSPEAR-AS2P59090 65 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMEM258P61165 79 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 HIST1H4AP62805 103 aaKnown RBP2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 ZNF56Q15929 161 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 CASC10Q5T4H9 136 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 VMO1Q7Z5L0 202 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 RPL39LQ96EH5 51 aaKnown RBP2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 PRO3102Q9H379 93 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 AHCTF1Q8WYP5 2266 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 NOTCH2Q04721 2471 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 C5orf42Q9H799 3197 aa2.41□□□□□ -2.02
HMGB3P23-201ENST00000414981 TRAV13-1A0A0B4J241 112 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 UBE2L6O14933 153 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 NDUFA1O15239 70 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 PLXNB1O43157 2135 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 ATP5EP2Q5VTU8 51 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 SFTA2Q6UW10 78 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 Q6ZQT7 251 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 LINC00467Q9BRT7 94 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 CADP27708 2225 aa2.4□□□□□ -2.03
HMGB3P23-201ENST00000414981 MKI67P46013 3256 aaKnown RBP2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 TRAV13-2A0A0B4J235 113 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 TRBV10-3A0A0K0K1G6 114 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 A8MTW9 85 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 H0YGX0 51 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 RPL39P62891 51 aaKnown RBP2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 DEFB109BQ30KR1 87 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 PRR9Q5T870 116 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 Q6JHZ5 121 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 PHF5AQ7RTV0 110 aaKnown RBP2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 C5orf56Q8N8D9 126 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 OBSCN-AS1Q96MR7 158 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 SDK1Q7Z5N4 2213 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 ABCA1O95477 2261 aa2.39□□□□□ -2.03
HMGB3P23-201ENST00000414981 DNAH14Q0VDD8 3507 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 ZGRF1Q86YA3 2104 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 H3BQ85 93 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 GNRH2O43555 120 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 IGHV3-23P01764 117 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 CD28P10747 220 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 RPL28P46779 137 aaKnown RBP2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 SNRPD3P62318 126 aaKnown RBP2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 ARFGEF3Q5TH69 2177 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 SERP2Q8N6R1 65 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 C7orf33Q8WU49 177 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 PLCE1Q9P212 2302 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 S4R3C0 116 aa2.38□□□□□ -2.03
HMGB3P23-201ENST00000414981 LAMA2P24043 3122 aaKnown RBP2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 IGHV3-74A0A0B4J1X5 117 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 JMJD7-PLA2G4BH0Y9G9 81 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 H7C2G1 150 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 BAALC-AS2P0C853 105 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 LINC01554Q52M75 96 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 LINC00308Q8TCZ7 52 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 B9D2Q9BPU9 175 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 RHPN1-AS1Q9BWJ2 59 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 UBE2D4Q9Y2X8 147 aa2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 RANBP2P49792 3224 aaKnown RBP2.37□□□□□ -2.03
HMGB3P23-201ENST00000414981 TRBV10-1A0A0K0K1A3 114 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 DNAL4O96015 105 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 IGHV3-53P01767 116 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 LYPD5Q6UWN5 251 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 SCXQ7RTU7 201 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms