RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
LINC00887-202ENST00000414120 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
LINC00887-202ENST00000414120 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
LINC00887-202ENST00000414120 CXCL6P80162 114 aa9.94□□□□□ -0.82
LINC00887-202ENST00000414120 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
LINC00887-202ENST00000414120 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
LINC00887-202ENST00000414120 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
LINC00887-202ENST00000414120 TRAV22A0A0B4J277 110 aa9.92□□□□□ -0.82
LINC00887-202ENST00000414120 NDUFA1O15239 70 aa9.92□□□□□ -0.82
LINC00887-202ENST00000414120 MYO9AB2RTY4 2548 aa9.92□□□□□ -0.82
LINC00887-202ENST00000414120 ARFGEF3Q5TH69 2177 aa9.92□□□□□ -0.82
LINC00887-202ENST00000414120 LY6HO94772 140 aa9.92□□□□□ -0.82
LINC00887-202ENST00000414120 CSPG4Q6UVK1 2322 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 Q8TAT8 98 aa9.91□□□□□ -0.82
LINC00887-202ENST00000414120 C17orf58Q2M2W7 97 aa9.9□□□□□ -0.82
LINC00887-202ENST00000414120 WFDC9Q8NEX5 89 aa9.9□□□□□ -0.82
LINC00887-202ENST00000414120 CXXC4Q9H2H0 198 aa9.9□□□□□ -0.82
LINC00887-202ENST00000414120 TNCP24821 2201 aa9.9□□□□□ -0.82
LINC00887-202ENST00000414120 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 CCL19Q99731 98 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 Q9HAA7 133 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 IGKV1-17P01599 117 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 ESM1Q9NQ30 184 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 C9orf129Q5T035 196 aaKnown RBP9.89□□□□□ -0.83
LINC00887-202ENST00000414120 SMAD5-AS1Q9Y6J3 95 aa9.89□□□□□ -0.83
LINC00887-202ENST00000414120 ACANP16112 2415 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 ARHGAP32A7KAX9 2087 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
LINC00887-202ENST00000414120 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 NREPQ16612 68 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 C11orf21Q9P2W6 132 aa9.88□□□□□ -0.83
LINC00887-202ENST00000414120 LYNX1G3V0Z9 82 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 LYNX1P0DP58 116 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 CCL17Q92583 94 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 A0A0J9YXV3 536 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 HCP5Q6MZN7 132 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 CYP4F30PQ9H0H9 118 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 TEX15Q9BXT5 2789 aa9.87□□□□□ -0.83
LINC00887-202ENST00000414120 I3L2K1 104 aa9.86□□□□□ -0.83
LINC00887-202ENST00000414120 IGLV2-23P01705 113 aa9.86□□□□□ -0.83
LINC00887-202ENST00000414120 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
LINC00887-202ENST00000414120 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 LOC100131303A0A0U1RQF7 123 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 CLEC19AQ6UXS0 136 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 LENEPQ9Y5L5 61 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 IGHV1-46P01743 117 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 MAST4O15021 2626 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 NDPQ00604 133 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
LINC00887-202ENST00000414120 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
LINC00887-202ENST00000414120 WNK2Q9Y3S1 2297 aa9.84□□□□□ -0.83
LINC00887-202ENST00000414120 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
LINC00887-202ENST00000414120 NCR3O14931 201 aa9.84□□□□□ -0.83
LINC00887-202ENST00000414120 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
LINC00887-202ENST00000414120 RPL27AP46776 148 aaKnown RBP9.83□□□□□ -0.84
LINC00887-202ENST00000414120 LINC01547P58512 204 aaPredicted RBP9.83□□□□□ -0.84
LINC00887-202ENST00000414120 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
LINC00887-202ENST00000414120 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
LINC00887-202ENST00000414120 ZNF580Q9UK33 172 aa9.83□□□□□ -0.84
LINC00887-202ENST00000414120 PSPHP1O15172 72 aa9.82□□□□□ -0.84
LINC00887-202ENST00000414120 Q5VV11 94 aa9.82□□□□□ -0.84
LINC00887-202ENST00000414120 VPS13CQ709C8 3753 aa9.82□□□□□ -0.84
LINC00887-202ENST00000414120 MTORP42345 2549 aa9.82□□□□□ -0.84
LINC00887-202ENST00000414120 MGPP08493 103 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 C20orf203Q8NBC4 194 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 SONP18583 2426 aaKnown RBP9.81□□□□□ -0.84
LINC00887-202ENST00000414120 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
LINC00887-202ENST00000414120 C11orf71Q6IPW1 123 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 CELSR1Q9NYQ6 3014 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 MRGPRG-AS1Q2M3A8 158 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 Q9H8V8 135 aa9.81□□□□□ -0.84
LINC00887-202ENST00000414120 ZANQ9Y493 2812 aa9.8□□□□□ -0.84
LINC00887-202ENST00000414120 GNRH2O43555 120 aa9.8□□□□□ -0.84
LINC00887-202ENST00000414120 LEAP2Q969E1 77 aa9.8□□□□□ -0.84
LINC00887-202ENST00000414120 A0A087WYN8 130 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 SRRM5B3KS81 715 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 Q8N3U1 123 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 LINC00315P59091 139 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 C9orf47Q6ZRZ4 202 aa9.79□□□□□ -0.84
LINC00887-202ENST00000414120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.79□□□□□ -0.84
LINC00887-202ENST00000414120 CRPP02741 224 aa9.78□□□□□ -0.84
LINC00887-202ENST00000414120 TFF1P04155 84 aa9.78□□□□□ -0.84
LINC00887-202ENST00000414120 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
LINC00887-202ENST00000414120 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.84
LINC00887-202ENST00000414120 TRAV21A0A0B4J279 112 aa9.77□□□□□ -0.84
LINC00887-202ENST00000414120 PSCAO43653 123 aa9.77□□□□□ -0.84
LINC00887-202ENST00000414120 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.84
LINC00887-202ENST00000414120 MALRD1Q5VYJ5 2156 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 ABCA1O95477 2261 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 TRBV6-8A0A0A6YYG3 113 aa9.77□□□□□ -0.85
LINC00887-202ENST00000414120 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms