RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PRO1854Q9UHT4 67 aa17.12■□□□□ 0.33
VRK2-202ENST00000412104 DAD1P61803 113 aa17.11■□□□□ 0.33
VRK2-202ENST00000412104 MIAQ16674 131 aa17.11■□□□□ 0.33
VRK2-202ENST00000412104 CELA1Q9UNI1 258 aa17.11■□□□□ 0.33
VRK2-202ENST00000412104 TIMM17BO60830 172 aa17.11■□□□□ 0.33
VRK2-202ENST00000412104 A0A0B4J2C4 111 aa17.1■□□□□ 0.33
VRK2-202ENST00000412104 OCIAD2Q56VL3 154 aa17.1■□□□□ 0.33
VRK2-202ENST00000412104 Q9H8V8 135 aa17.1■□□□□ 0.33
VRK2-202ENST00000412104 IGKV3OR2-268A0A0C4DH90 116 aa17.09■□□□□ 0.33
VRK2-202ENST00000412104 H3BMG7 143 aa17.09■□□□□ 0.33
VRK2-202ENST00000412104 PRSS2P07478 247 aa17.09■□□□□ 0.33
VRK2-202ENST00000412104 OXLD1Q5BKU9 147 aa17.09■□□□□ 0.33
VRK2-202ENST00000412104 FLNBO75369 2602 aaKnown RBP17.09■□□□□ 0.33
VRK2-202ENST00000412104 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.09■□□□□ 0.33
VRK2-202ENST00000412104 SFTA2Q6UW10 78 aa17.09■□□□□ 0.33
VRK2-202ENST00000412104 A0A096LPF7 62 aa17.08■□□□□ 0.33
VRK2-202ENST00000412104 LOC107984156A0A0G2JMH3 177 aa17.08■□□□□ 0.32
VRK2-202ENST00000412104 ARL17AQ8IVW1 177 aa17.08■□□□□ 0.32
VRK2-202ENST00000412104 ATP5G1P05496 136 aa17.06■□□□□ 0.32
VRK2-202ENST00000412104 IGHV3-33P01772 117 aa17.05■□□□□ 0.32
VRK2-202ENST00000412104 SPART-AS1P0CW21 52 aa17.05■□□□□ 0.32
VRK2-202ENST00000412104 KRTAP10-11P60412 298 aa17.05■□□□□ 0.32
VRK2-202ENST00000412104 NPC2P61916 151 aa17.05■□□□□ 0.32
VRK2-202ENST00000412104 ZNF625Q96I27 306 aaPredicted RBP17.05■□□□□ 0.32
VRK2-202ENST00000412104 CIRBPQ14011 172 aaKnown RBP17.04■□□□□ 0.32
VRK2-202ENST00000412104 LYRM7Q5U5X0 104 aa17.04■□□□□ 0.32
VRK2-202ENST00000412104 DAND5Q8N907 189 aa17.04■□□□□ 0.32
VRK2-202ENST00000412104 TMEM262E9PQX1 116 aa17.03■□□□□ 0.32
VRK2-202ENST00000412104 F8W1H4 67 aa17.03■□□□□ 0.32
VRK2-202ENST00000412104 C3orf56Q8N813 242 aa17.03■□□□□ 0.32
VRK2-202ENST00000412104 A0A1B0GUV1 79 aa17.02■□□□□ 0.32
VRK2-202ENST00000412104 IFITM1P13164 125 aa17.02■□□□□ 0.32
VRK2-202ENST00000412104 RBX1P62877 108 aa17.02■□□□□ 0.32
VRK2-202ENST00000412104 PRIMA1Q86XR5 153 aa17.02■□□□□ 0.32
VRK2-202ENST00000412104 ERG28Q9UKR5 140 aa17.02■□□□□ 0.31
VRK2-202ENST00000412104 TRAV26-1A0A087WT03 109 aa17.01■□□□□ 0.31
VRK2-202ENST00000412104 IGHV3OR16-9A0A0B4J2B5 98 aa17.01■□□□□ 0.31
VRK2-202ENST00000412104 LINC00959A0A1B0GUT2 108 aa17■□□□□ 0.31
VRK2-202ENST00000412104 PSMB2P49721 201 aa17■□□□□ 0.31
VRK2-202ENST00000412104 PRO0461Q9UI25 63 aa17■□□□□ 0.31
VRK2-202ENST00000412104 H7C2G1 150 aa16.99■□□□□ 0.31
VRK2-202ENST00000412104 K7ERU9 68 aa16.99■□□□□ 0.31
VRK2-202ENST00000412104 HERV-K104P63124 156 aa16.99■□□□□ 0.31
VRK2-202ENST00000412104 MTURNQ8N3F0 131 aa16.99■□□□□ 0.31
VRK2-202ENST00000412104 WFDC2Q14508 124 aa16.98■□□□□ 0.31
VRK2-202ENST00000412104 SHISA2Q6UWI4 295 aa16.98■□□□□ 0.31
VRK2-202ENST00000412104 COX7B2Q8TF08 81 aa16.98■□□□□ 0.31
VRK2-202ENST00000412104 EGFEM1PQ0D2K5 195 aa16.98■□□□□ 0.31
VRK2-202ENST00000412104 HTN3P15516 51 aa16.97■□□□□ 0.31
VRK2-202ENST00000412104 MEIG1Q5JSS6 88 aa16.97■□□□□ 0.31
VRK2-202ENST00000412104 A0A087WZ39 114 aa16.96■□□□□ 0.31
VRK2-202ENST00000412104 A0A0U1RRA0 63 aa16.96■□□□□ 0.31
VRK2-202ENST00000412104 TCL1BO95988 128 aa16.96■□□□□ 0.31
VRK2-202ENST00000412104 Q1RN00 199 aa16.96■□□□□ 0.31
VRK2-202ENST00000412104 RNF151Q2KHN1 245 aa16.96■□□□□ 0.3
VRK2-202ENST00000412104 LINC00308Q8TCZ7 52 aa16.96■□□□□ 0.3
VRK2-202ENST00000412104 TRBV20-1A0A075B6N2 111 aa16.95■□□□□ 0.3
VRK2-202ENST00000412104 SCGB1C2P0DMR2 95 aa16.95■□□□□ 0.3
VRK2-202ENST00000412104 TOMM7Q9P0U1 55 aa16.94■□□□□ 0.3
VRK2-202ENST00000412104 CLPSL2Q6UWE3 100 aa16.94■□□□□ 0.3
VRK2-202ENST00000412104 C5orf38Q86SI9 138 aa16.94■□□□□ 0.3
VRK2-202ENST00000412104 SS18Q15532 418 aa16.93■□□□□ 0.3
VRK2-202ENST00000412104 RETNQ9HD89 108 aa16.93■□□□□ 0.3
VRK2-202ENST00000412104 FBN1P35555 2871 aaKnown RBP16.92■□□□□ 0.3
VRK2-202ENST00000412104 MRPL23Q16540 153 aaKnown RBP16.92■□□□□ 0.3
VRK2-202ENST00000412104 TEX48A0A1B0GUV7 120 aa16.92■□□□□ 0.3
VRK2-202ENST00000412104 XCL1P47992 114 aa16.91■□□□□ 0.3
VRK2-202ENST00000412104 SOSTDC1Q6X4U4 206 aa16.9■□□□□ 0.3
VRK2-202ENST00000412104 COPS9Q8WXC6 57 aa16.9■□□□□ 0.3
VRK2-202ENST00000412104 ICOSQ9Y6W8 199 aa16.9■□□□□ 0.3
VRK2-202ENST00000412104 Q8N3U1 123 aa16.89■□□□□ 0.29
VRK2-202ENST00000412104 TRBV30A0A0K0K1B3 111 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 G3V4G9 280 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 TRIAP1O43715 76 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 SMCPP49901 116 aaPredicted RBP16.88■□□□□ 0.29
VRK2-202ENST00000412104 ETDBQ3ZM63 59 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 SH2D6Q7Z4S9 175 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 LINC00269Q8N2A0 174 aa16.88■□□□□ 0.29
VRK2-202ENST00000412104 CYSRT1A8MQ03 144 aa16.87■□□□□ 0.29
VRK2-202ENST00000412104 RPL13AP40429 203 aaKnown RBP16.86■□□□□ 0.29
VRK2-202ENST00000412104 ANGP03950 147 aaKnown RBP16.85■□□□□ 0.29
VRK2-202ENST00000412104 LELP1Q5T871 98 aa16.85■□□□□ 0.29
VRK2-202ENST00000412104 STAB1Q9NY15 2570 aa16.84■□□□□ 0.29
VRK2-202ENST00000412104 CBY1Q9Y3M2 126 aa16.84■□□□□ 0.29
VRK2-202ENST00000412104 VPS25Q9BRG1 176 aa16.84■□□□□ 0.29
VRK2-202ENST00000412104 PPDPFQ9H3Y8 114 aa16.84■□□□□ 0.29
VRK2-202ENST00000412104 REG3AQ06141 175 aa16.83■□□□□ 0.28
VRK2-202ENST00000412104 LINC01561Q8N1V8 128 aa16.82■□□□□ 0.28
VRK2-202ENST00000412104 CMYA5Q8N3K9 4069 aa16.81■□□□□ 0.28
VRK2-202ENST00000412104 MIR7-3HGQ8N6C7 128 aa16.81■□□□□ 0.28
VRK2-202ENST00000412104 CD164L2Q6UWJ8 174 aa16.8■□□□□ 0.28
VRK2-202ENST00000412104 CHCHD10Q8WYQ3 142 aaPredicted RBP16.8■□□□□ 0.28
VRK2-202ENST00000412104 C11orf68Q9H3H3 251 aaKnown RBP16.8■□□□□ 0.28
VRK2-202ENST00000412104 IBA57-AS1B1ANH7 110 aa16.79■□□□□ 0.28
VRK2-202ENST00000412104 ATXN8Q156A1 80 aa16.79■□□□□ 0.28
VRK2-202ENST00000412104 C6orf226Q5I0X4 101 aa16.79■□□□□ 0.28
VRK2-202ENST00000412104 Q8IZM0 81 aa16.79■□□□□ 0.28
VRK2-202ENST00000412104 LINC00158P58513 81 aa16.78■□□□□ 0.28
VRK2-202ENST00000412104 IGLV10-54A0A075B6I4 117 aa16.78■□□□□ 0.28
VRK2-202ENST00000412104 COX6CP09669 75 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms