RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 PTTG1IPP53801 180 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 HBBP68871 147 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 C10orf91Q5T1B1 145 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 ATP5L2Q7Z4Y8 100 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 SEC11CQ9BY50 192 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 IGHV1-58A0A0C4DH39 117 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 ZNF561-AS1K7EIQ3 104 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 VCYO14598 125 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 PPP1R17O96001 155 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 APCSP02743 223 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 S100A8P05109 93 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 CKS2P33552 79 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 RPL13AP40429 203 aaKnown RBP3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 UBE2D1P51668 147 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 RPL32P62910 135 aaKnown RBP3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 SYCNQ0VAF6 134 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 GAGE2BQ13066 116 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 C1orf137Q5JT78 98 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 COMMD7Q86VX2 200 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 IMMP2LQ96T52 175 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 CTDSP1Q9GZU7 261 aa3.64□□□□□ -1.83
HMGN1P20-201ENST00000411849 LPAP08519 4548 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 D6R8Y8 96 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 H0Y9J4 135 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 TNFRSF6BO95407 300 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 PPBPP02775 128 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 IGLV7-43P04211 117 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 FGF6P10767 208 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 FOXI1Q12951 378 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 BTF3L4Q96K17 158 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 TMEM242Q9NWH2 141 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 MUC2Q02817 5179 aa3.63□□□□□ -1.83
HMGN1P20-201ENST00000411849 C7orf77A4D0Y5 90 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 PRSS47A8MTI9 375 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 NPYP01303 97 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 ZNF25P17030 456 aaPredicted RBP3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 XCL1P47992 114 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 RNASEKQ6P5S7 137 aaKnown RBP3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 MRPL52Q86TS9 123 aaKnown RBP3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 LINC00526Q96FQ7 95 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 CDC42SE2Q9NRR3 84 aa3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 CARHSP1Q9Y2V2 147 aaKnown RBP3.62□□□□□ -1.83
HMGN1P20-201ENST00000411849 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 A0A1W2PNN7 141 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 CCL25O15444 150 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 APOMO95445 188 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 SS18Q15532 418 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 OR5A1Q8NGJ0 315 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 TMEM101Q96IK0 257 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 PRELID3AQ96N28 172 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 KIR2DL4Q99706 377 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 CSDC2Q9Y534 153 aaKnown RBP3.61□□□□□ -1.83
HMGN1P20-201ENST00000411849 IGLV4-69A0A075B6H9 119 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 A0A087WZ39 114 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 LINC00959A0A1B0GUT2 108 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 TCAPO15273 167 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 FCER1GP30273 86 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 RPL39P62891 51 aaKnown RBP3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 RHEBQ15382 184 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 PHF5AQ7RTV0 110 aaKnown RBP3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 CAMK2N2Q96S95 79 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 TIMM21Q9BVV7 248 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 LAMTOR2Q9Y2Q5 125 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 UBE2D4Q9Y2X8 147 aa3.6□□□□□ -1.83
HMGN1P20-201ENST00000411849 LOC389332A0A1B0GUA5 103 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 MALP21145 153 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 KIAA1644Q3SXP7 199 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 Q8N8P6 123 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 GNB1LQ9BYB4 327 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 MAP1LC3AQ9H492 121 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
HMGN1P20-201ENST00000411849 SNAPINO95295 136 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 TSPAN13O95857 204 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 APOC3P02656 99 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 RAB5AP20339 215 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 S100PP25815 95 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 COX19Q49B96 90 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 RNASE13Q5GAN3 156 aaKnown RBP3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 OPRPNQ99935 248 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P20-201ENST00000411849 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms