RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TMEM262E9PQX1 116 aa14.42□□□□□ -0.1
USP39-203ENST00000409470 F5H768 121 aa14.42□□□□□ -0.1
USP39-203ENST00000409470 APOMO95445 188 aa14.42□□□□□ -0.1
USP39-203ENST00000409470 IGLV5-39A0A0G2JS06 123 aa14.42□□□□□ -0.1
USP39-203ENST00000409470 HTN3P15516 51 aa14.42□□□□□ -0.1
USP39-203ENST00000409470 TRAV26-1A0A087WT03 109 aa14.41□□□□□ -0.1
USP39-203ENST00000409470 SMIM1B2RUZ4 78 aa14.41□□□□□ -0.1
USP39-203ENST00000409470 MUSTN1Q8IVN3 82 aa14.4□□□□□ -0.1
USP39-203ENST00000409470 NDUFA1O15239 70 aa14.39□□□□□ -0.11
USP39-203ENST00000409470 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
USP39-203ENST00000409470 RPL24P83731 157 aaKnown RBP14.39□□□□□ -0.11
USP39-203ENST00000409470 LITAFQ99732 161 aa14.39□□□□□ -0.11
USP39-203ENST00000409470 RETNQ9HD89 108 aa14.39□□□□□ -0.11
USP39-203ENST00000409470 MAST4O15021 2626 aa14.38□□□□□ -0.11
USP39-203ENST00000409470 TEX48A0A1B0GUV7 120 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 A4D1N5 150 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 PRSS2P07478 247 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 CFC1BP0CG36 223 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 CFC1P0CG37 223 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 G3V4G9 280 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 RBX1P62877 108 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 Q9H8V8 135 aa14.37□□□□□ -0.11
USP39-203ENST00000409470 ADAMTSL4-AS1Q5T5F5 129 aa14.36□□□□□ -0.11
USP39-203ENST00000409470 A0A1B0GUV1 79 aa14.36□□□□□ -0.11
USP39-203ENST00000409470 SPANXDQ9BXN6 97 aa14.36□□□□□ -0.11
USP39-203ENST00000409470 SPANXCQ9NY87 97 aa14.36□□□□□ -0.11
USP39-203ENST00000409470 MRPL23Q16540 153 aaKnown RBP14.34□□□□□ -0.11
USP39-203ENST00000409470 TIMM17BO60830 172 aa14.34□□□□□ -0.11
USP39-203ENST00000409470 CIRBPQ14011 172 aaKnown RBP14.34□□□□□ -0.11
USP39-203ENST00000409470 MIAQ16674 131 aa14.34□□□□□ -0.11
USP39-203ENST00000409470 LINC00959A0A1B0GUT2 108 aa14.33□□□□□ -0.12
USP39-203ENST00000409470 TSPAN13O95857 204 aa14.33□□□□□ -0.12
USP39-203ENST00000409470 ICOSQ9Y6W8 199 aa14.33□□□□□ -0.12
USP39-203ENST00000409470 ZNF625Q96I27 306 aaPredicted RBP14.32□□□□□ -0.12
USP39-203ENST00000409470 PRO1854Q9UHT4 67 aa14.32□□□□□ -0.12
USP39-203ENST00000409470 CMYA5Q8N3K9 4069 aa14.32□□□□□ -0.12
USP39-203ENST00000409470 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.32□□□□□ -0.12
USP39-203ENST00000409470 PKD1L1Q8TDX9 2849 aa14.31□□□□□ -0.12
USP39-203ENST00000409470 NPC2P61916 151 aa14.31□□□□□ -0.12
USP39-203ENST00000409470 IGHV3OR16-9A0A0B4J2B5 98 aa14.31□□□□□ -0.12
USP39-203ENST00000409470 SS18Q15532 418 aa14.31□□□□□ -0.12
USP39-203ENST00000409470 CLPSL2Q6UWE3 100 aa14.3□□□□□ -0.12
USP39-203ENST00000409470 SH2D6Q7Z4S9 175 aa14.3□□□□□ -0.12
USP39-203ENST00000409470 A0A0B4J2C4 111 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 SFTA2Q6UW10 78 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 C5orf38Q86SI9 138 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 DAND5Q8N907 189 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 COX7B2Q8TF08 81 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 TOMM7Q9P0U1 55 aa14.29□□□□□ -0.12
USP39-203ENST00000409470 LOC107984156A0A0G2JMH3 177 aa14.28□□□□□ -0.12
USP39-203ENST00000409470 HERV-K104P63124 156 aa14.28□□□□□ -0.12
USP39-203ENST00000409470 MEIG1Q5JSS6 88 aa14.28□□□□□ -0.12
USP39-203ENST00000409470 ARL17AQ8IVW1 177 aa14.28□□□□□ -0.12
USP39-203ENST00000409470 A0A087WZ39 114 aa14.27□□□□□ -0.12
USP39-203ENST00000409470 XCL1P47992 114 aa14.27□□□□□ -0.12
USP39-203ENST00000409470 COL6A5A8TX70 2615 aa14.27□□□□□ -0.13
USP39-203ENST00000409470 A0A0U1RRA0 63 aa14.27□□□□□ -0.13
USP39-203ENST00000409470 EIF4EBP3O60516 100 aaPredicted RBP14.27□□□□□ -0.13
USP39-203ENST00000409470 IFITM1P13164 125 aa14.27□□□□□ -0.13
USP39-203ENST00000409470 LINC00269Q8N2A0 174 aa14.26□□□□□ -0.13
USP39-203ENST00000409470 ANGP03950 147 aaKnown RBP14.25□□□□□ -0.13
USP39-203ENST00000409470 LELP1Q5T871 98 aa14.25□□□□□ -0.13
USP39-203ENST00000409470 C11orf68Q9H3H3 251 aaKnown RBP14.25□□□□□ -0.13
USP39-203ENST00000409470 ERG28Q9UKR5 140 aa14.25□□□□□ -0.13
USP39-203ENST00000409470 H3BMG7 143 aa14.24□□□□□ -0.13
USP39-203ENST00000409470 H7C2G1 150 aa14.24□□□□□ -0.13
USP39-203ENST00000409470 IGHV3-33P01772 117 aa14.24□□□□□ -0.13
USP39-203ENST00000409470 LYRM7Q5U5X0 104 aa14.24□□□□□ -0.13
USP39-203ENST00000409470 Q8N3U1 123 aa14.24□□□□□ -0.13
USP39-203ENST00000409470 Q6ZTC4 211 aa14.22□□□□□ -0.13
USP39-203ENST00000409470 A0A0J9YWU9 116 aa14.22□□□□□ -0.13
USP39-203ENST00000409470 Q1RN00 199 aa14.22□□□□□ -0.13
USP39-203ENST00000409470 LINC00308Q8TCZ7 52 aa14.22□□□□□ -0.13
USP39-203ENST00000409470 REG3AQ06141 175 aa14.21□□□□□ -0.13
USP39-203ENST00000409470 ANK2Q01484 3957 aa14.21□□□□□ -0.14
USP39-203ENST00000409470 SCGB1C2P0DMR2 95 aa14.2□□□□□ -0.14
USP39-203ENST00000409470 PSMB2P49721 201 aa14.2□□□□□ -0.14
USP39-203ENST00000409470 COPS9Q8WXC6 57 aa14.2□□□□□ -0.14
USP39-203ENST00000409470 PRB2P02812 416 aaPredicted RBP14.2□□□□□ -0.14
USP39-203ENST00000409470 KPRPQ5T749 579 aaPredicted RBP14.19□□□□□ -0.14
USP39-203ENST00000409470 LYPD5Q6UWN5 251 aa14.19□□□□□ -0.14
USP39-203ENST00000409470 H3BNG1 76 aa14.18□□□□□ -0.14
USP39-203ENST00000409470 CHCHD10Q8WYQ3 142 aaPredicted RBP14.18□□□□□ -0.14
USP39-203ENST00000409470 DNAH3Q8TD57 4116 aa14.18□□□□□ -0.14
USP39-203ENST00000409470 IGLV10-54A0A075B6I4 117 aa14.17□□□□□ -0.14
USP39-203ENST00000409470 C6orf226Q5I0X4 101 aa14.17□□□□□ -0.14
USP39-203ENST00000409470 CD164L2Q6UWJ8 174 aa14.17□□□□□ -0.14
USP39-203ENST00000409470 F8W1H4 67 aa14.17□□□□□ -0.14
USP39-203ENST00000409470 NANOS2P60321 138 aaKnown RBP14.16□□□□□ -0.14
USP39-203ENST00000409470 OCIAD2Q56VL3 154 aa14.16□□□□□ -0.14
USP39-203ENST00000409470 C11orf45Q8TAV5 145 aa14.16□□□□□ -0.14
USP39-203ENST00000409470 LINC01561Q8N1V8 128 aa14.15□□□□□ -0.14
USP39-203ENST00000409470 TRBV20-1A0A075B6N2 111 aa14.15□□□□□ -0.14
USP39-203ENST00000409470 COX7A2LO14548 114 aa14.15□□□□□ -0.14
USP39-203ENST00000409470 SOSTDC1Q6X4U4 206 aa14.15□□□□□ -0.14
USP39-203ENST00000409470 NOTCH1P46531 2555 aa14.14□□□□□ -0.15
USP39-203ENST00000409470 TCL1BO95988 128 aa14.14□□□□□ -0.15
USP39-203ENST00000409470 MTURNQ8N3F0 131 aa14.14□□□□□ -0.15
USP39-203ENST00000409470 LINC00158P58513 81 aa14.14□□□□□ -0.15
USP39-203ENST00000409470 WFDC2Q14508 124 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms