RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SHANK2-203ENST00000409161 LOC107984640A0A0U1RRK4 108 aa9.04□□□□□ -0.96
SHANK2-203ENST00000409161 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
SHANK2-203ENST00000409161 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 WFDC13Q8IUB5 93 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
SHANK2-203ENST00000409161 EBI3Q14213 229 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 LY6LH3BQJ8 138 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 TSHBP01222 138 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
SHANK2-203ENST00000409161 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
SHANK2-203ENST00000409161 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 Q6ZVQ6 151 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
SHANK2-203ENST00000409161 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
SHANK2-203ENST00000409161 LELP1Q5T871 98 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 XAGE1AQ9HD64 81 aa9.01□□□□□ -0.97
SHANK2-203ENST00000409161 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 RPL28P46779 137 aaKnown RBP9□□□□□ -0.97
SHANK2-203ENST00000409161 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 IGKV2D-28P01615 120 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 F8WDY8 70 aa9□□□□□ -0.97
SHANK2-203ENST00000409161 Q8N814 137 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 DEFB1P60022 68 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 IGLV2-11P01706 119 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 Q8N976 141 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 A0A096LNI7 61 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 C22orf34Q6ZV56 151 aa8.99□□□□□ -0.97
SHANK2-203ENST00000409161 CRIP1P50238 77 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 ADORA2A-AS1P86434 159 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 TRAV10A0A0B4J240 114 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 KLLNB2CW77 178 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 COL4A3Q01955 1670 aa8.98□□□□□ -0.97
SHANK2-203ENST00000409161 Q6YL49 198 aa8.97□□□□□ -0.97
SHANK2-203ENST00000409161 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
SHANK2-203ENST00000409161 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.97
SHANK2-203ENST00000409161 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
SHANK2-203ENST00000409161 ESRGQ1W209 222 aa8.96□□□□□ -0.98
SHANK2-203ENST00000409161 CXCL6P80162 114 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 IGF2RP11717 2491 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 MUC22E2RYF6 1773 aaPredicted RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 PRR4Q16378 134 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 CSDC2Q9Y534 153 aaKnown RBP8.95□□□□□ -0.98
SHANK2-203ENST00000409161 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
SHANK2-203ENST00000409161 ANKRD11Q6UB99 2663 aaPredicted RBP8.94□□□□□ -0.98
SHANK2-203ENST00000409161 PRORYQ9H606 182 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 C1orf137Q5JT78 98 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
SHANK2-203ENST00000409161 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
SHANK2-203ENST00000409161 TRBV7-7A0A0K0K1E9 115 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
SHANK2-203ENST00000409161 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
SHANK2-203ENST00000409161 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 Q8N3U1 123 aa8.92□□□□□ -0.98
SHANK2-203ENST00000409161 KPRPQ5T749 579 aaPredicted RBP8.91□□□□□ -0.98
SHANK2-203ENST00000409161 EGFEM1PQ0D2K5 195 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 A8MZ25 164 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 NRGNQ92686 78 aa8.91□□□□□ -0.98
SHANK2-203ENST00000409161 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 LMO4P61968 165 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGHV4-30-4P0DP06 118 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGHV4-31P0DP07 118 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 NCOR2Q9Y618 2525 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 Q6ZS46 218 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 PCSK5Q92824 1860 aa8.9□□□□□ -0.98
SHANK2-203ENST00000409161 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 PSPHP1O15172 72 aa8.9□□□□□ -0.99
SHANK2-203ENST00000409161 H0Y9P7 68 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
SHANK2-203ENST00000409161 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
SHANK2-203ENST00000409161 LOC100131303A0A0U1RQF7 123 aa8.88□□□□□ -0.99
SHANK2-203ENST00000409161 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
SHANK2-203ENST00000409161 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
SHANK2-203ENST00000409161 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 POM121L12Q8N7R1 296 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 SHISA2Q6UWI4 295 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 SPTBN4Q9H254 2564 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 RPL37AP8A6NKH3 93 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
SHANK2-203ENST00000409161 BBC3Q96PG8 261 aaPredicted RBP8.87□□□□□ -0.99
SHANK2-203ENST00000409161 A0A1B0GW54 56 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms