RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 AMELXQ99217 191 aa3.42□□□□□ -1.86
PCDH11X-207ENST00000406881 NDUFV3P56181 108 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-207ENST00000406881 F8P00451 2351 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 TRBV30A0A0K0K1B3 111 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 LINC00959A0A1B0GUT2 108 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 PCNTO95613 3336 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 JMJD7-PLA2G4BH0Y9G9 81 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 M0QXV9 152 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 PRM2P04554 102 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 IGLV4-69A0A075B6H9 119 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 ETDCA0A1B0GVM5 59 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 LINC00315P59091 139 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 FHL2Q14192 279 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 DIRC1Q969H9 104 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 LINC00242Q5T6M2 205 aa3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 KPRPQ5T749 579 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-207ENST00000406881 LOC100131303A0A0U1RQF7 123 aa3.4□□□□□ -1.86
PCDH11X-207ENST00000406881 RPL18AQ02543 176 aaKnown RBP3.4□□□□□ -1.86
PCDH11X-207ENST00000406881 USP34Q70CQ2 3546 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 TCL1BO95988 128 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 PDE6GP18545 87 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 Q8IZM0 81 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 A8MTW9 85 aa3.4□□□□□ -1.87
PCDH11X-207ENST00000406881 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 LECT2O14960 151 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 UBE2BP63146 152 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 COX17Q14061 63 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 OXLD1Q5BKU9 147 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 COX7BP24311 80 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
PCDH11X-207ENST00000406881 A0A087WZ39 114 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 SMIM1B2RUZ4 78 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 NCR3O14931 201 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 TNRC18O15417 2968 aaPredicted RBP3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 Q6ZSN1 163 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 TRIAP1O43715 76 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 XGP55808 180 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
PCDH11X-207ENST00000406881 A0A1B0GX51 115 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 F8WDY8 70 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 FUSP35637 526 aaKnown RBP eCLIP3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 HAMPP81172 84 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 A8MZ25 164 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 LINC00694P0DN24 101 aa3.37□□□□□ -1.87
PCDH11X-207ENST00000406881 HECTD1Q9ULT8 2610 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 ANKRD17O75179 2603 aaKnown RBP3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 A0A0J9YWU9 116 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 LST1O00453 97 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 RBM3P98179 157 aaKnown RBP3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 TSPEAR-AS2P59090 65 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 BPTFQ12830 3046 aa3.36□□□□□ -1.87
PCDH11X-207ENST00000406881 M0R378 163 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 EGFEM1PQ0D2K5 195 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 LINC00643Q86TS7 51 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 ATOX1O00244 68 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 UQCRQO14949 82 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 COX6A2Q02221 97 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 V9GYY9 64 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 H3BNG1 76 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 AGRNO00468 2067 aa3.35□□□□□ -1.87
PCDH11X-207ENST00000406881 BAHCC1Q9P281 2608 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 NDUFC2O95298 119 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 KRTAP1-3Q8IUG1 177 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 PPDPFQ9H3Y8 114 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 UNC79Q9P2D8 2635 aa3.34□□□□□ -1.87
PCDH11X-207ENST00000406881 CYSRT1A8MQ03 144 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 UBE2AP49459 152 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 C6orf99Q4VX62 202 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 Q6ZTC4 211 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 BRK1Q8WUW1 75 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 X6R8D5 127 aa3.34□□□□□ -1.88
PCDH11X-207ENST00000406881 ACANP16112 2415 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 TRAV23DV6A0A075B6W5 121 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 C2orf48Q96LS8 159 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 RETNQ9HD89 108 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 ATRQ13535 2644 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 LOC107984640A0A0U1RRK4 108 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 NREPQ16612 68 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
PCDH11X-207ENST00000406881 SMIM11BQ8TCY0 68 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms