RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PRO2289Q9P1D8 64 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 C3P01024 1663 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 NHSQ6T4R5 1651 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 LY75O60449 1722 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 MUC4Q99102 2169 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 H7C2G1 150 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 NDUFA4L2Q9NRX3 87 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 NRXN3Q9Y4C0 1643 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 SCN7AQ01118 1682 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 PAPPA2Q9BXP8 1791 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 SIP14410 1827 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 LAMA4Q16363 1823 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ANKRD36A6QL64 1941 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 UBR3Q6ZT12 1888 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 TRBV7-4A0A0J9YYF1 115 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 LOC101927531A0A1B0GV80 90 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 MPDZO75970 2070 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 COL4A2P08572 1712 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 DOT1LQ8TEK3 1739 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 SAMD9LQ8IVG5 1584 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 A0A087WSZ3 146 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 HMGN4O00479 90 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 ARMS2P0C7Q2 107 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 LIMD2Q9BT23 127 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 PRR15LQ9BU68 103 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 ABRACLQ9P1F3 81 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 TIMM9Q9Y5J7 89 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 NINQ8N4C6 2090 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 RICTORQ6R327 1708 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL4A1P02462 1669 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 NHSL1Q5SYE7 1610 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV23DV6A0A075B6W5 121 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV1-18A0A0C4DH31 117 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 COX6CP09669 75 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 ATP5EP2Q5VTU8 51 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 QSER1Q2KHR3 1735 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TIAM2Q8IVF5 1701 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 DOCK11Q5JSL3 2073 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV10A0A0B4J240 114 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 IFI6P09912 130 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 KRTAP26-1Q6PEX3 210 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL11A1P12107 1806 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 E9PCH4 1651 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-33P01772 117 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 FCER1GP30273 86 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 SNRPGP62308 76 aaKnown RBP2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 ZFHX3Q15911 3703 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 ICE1Q9Y2F5 2266 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 CACNA1GO43497 2377 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 A0A0G2JQZ4 141 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 IL9P15248 144 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 TPRXLQ17RH7 258 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 TMEM254Q8TBM7 123 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 V9GYV3 84 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 DDX60LQ5H9U9 1706 aaKnown RBP2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 SHPRHQ149N8 1683 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 DIDO1Q9BTC0 2240 aaKnown RBP2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 MYOFQ9NZM1 2061 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 D6R8Y8 96 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 Q6ZTI0 123 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 MUSTN1Q8IVN3 82 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 SCN3AQ9NY46 2000 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 PCDH15Q96QU1 1955 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV1-2A0A0B4J238 106 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 A0A0J9YY99 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV6-5A0A0K0K1A5 114 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV30A0A0K0K1B3 111 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 M0R3E3 92 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-30P01768 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 SAA2P0DJI9 122 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-30-5P0DP03 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 PLAC8Q9NZF1 115 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 LHFPL6Q9Y693 200 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 CUL9Q8IWT3 2517 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 DLEC1Q9Y238 1755 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 IGKV3-7A0A075B6H7 116 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 SMIM27A0A1W2PRY6 76 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 J3QRE1 110 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 ERHP84090 104 aaKnown RBP2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 NRAPQ86VF7 1730 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 TMEM263Q8WUH6 116 aaKnown RBP2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms