RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FAM222AQ5U5X8 452 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 C16orf95Q9H693 158 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 PTPN13Q12923 2485 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 NAV2Q8IVL1 2488 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 IGLV1-51P01701 117 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 HIST2H2BCQ6DN03 193 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 NHLRC4P0CG21 123 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-204ENST00000404424 GAGE6Q13070 117 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 LINC01006Q8NI28 216 aa7.58□□□□□ -1.2
CLIP4-204ENST00000404424 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
CLIP4-204ENST00000404424 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
CLIP4-204ENST00000404424 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
CLIP4-204ENST00000404424 RPL28P46779 137 aaKnown RBP7.57□□□□□ -1.2
CLIP4-204ENST00000404424 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
CLIP4-204ENST00000404424 RNASE1P07998 156 aaKnown RBP7.56□□□□□ -1.2
CLIP4-204ENST00000404424 RPL35AP18077 110 aaKnown RBP7.56□□□□□ -1.2
CLIP4-204ENST00000404424 TEX15Q9BXT5 2789 aa7.56□□□□□ -1.2
CLIP4-204ENST00000404424 CRPP02741 224 aa7.56□□□□□ -1.2
CLIP4-204ENST00000404424 FHL2Q14192 279 aa7.56□□□□□ -1.2
CLIP4-204ENST00000404424 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
CLIP4-204ENST00000404424 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
CLIP4-204ENST00000404424 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
CLIP4-204ENST00000404424 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
CLIP4-204ENST00000404424 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
CLIP4-204ENST00000404424 ZNF462Q96JM2 2506 aa7.55□□□□□ -1.2
CLIP4-204ENST00000404424 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
CLIP4-204ENST00000404424 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 A0A087WZ39 114 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 IBA57-AS1B1ANH7 110 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 IMUPQ9GZP8 106 aa7.54□□□□□ -1.2
CLIP4-204ENST00000404424 WNK1Q9H4A3 2382 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 LRRK2Q5S007 2527 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 IGKV2-28A0A075B6P5 120 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 IGKV2D-28P01615 120 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 LINC00158P58513 81 aa7.53□□□□□ -1.2
CLIP4-204ENST00000404424 UBR5O95071 2799 aaPredicted RBP7.52□□□□□ -1.21
CLIP4-204ENST00000404424 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
CLIP4-204ENST00000404424 KIR2DL5BQ8NHK3 375 aa7.52□□□□□ -1.21
CLIP4-204ENST00000404424 H0YGX0 51 aa7.52□□□□□ -1.21
CLIP4-204ENST00000404424 MALP21145 153 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 CCL18P55774 89 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 LINC00959A0A1B0GUT2 108 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
CLIP4-204ENST00000404424 CHD6Q8TD26 2715 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 PLA2G2AP14555 144 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 KRTAP1-1Q07627 177 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 LINC00612Q8N6U2 182 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 ABCA12Q86UK0 2595 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 B5MCH6 92 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 DNAL4O96015 105 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
CLIP4-204ENST00000404424 C5orf38Q86SI9 138 aa7.49□□□□□ -1.21
CLIP4-204ENST00000404424 CCDC179H3BU77 68 aa7.49□□□□□ -1.21
CLIP4-204ENST00000404424 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
CLIP4-204ENST00000404424 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
CLIP4-204ENST00000404424 USP24Q9UPU5 2620 aa7.48□□□□□ -1.21
CLIP4-204ENST00000404424 SS18Q15532 418 aa7.48□□□□□ -1.21
CLIP4-204ENST00000404424 Q9HAA7 133 aa7.48□□□□□ -1.21
CLIP4-204ENST00000404424 DEFB130BP0DP73 79 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 DEFB130AP0DP74 79 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 HILS1P60008 231 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 TLN2Q9Y4G6 2542 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 SONP18583 2426 aaKnown RBP7.47□□□□□ -1.21
CLIP4-204ENST00000404424 GYPEP15421 78 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 PFN2P35080 140 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 Q8IZM0 81 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 SMCR5Q8TEV8 140 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 CENPEQ02224 2701 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 NOTCH3Q9UM47 2321 aa7.47□□□□□ -1.21
CLIP4-204ENST00000404424 SMIM9A6NGZ8 99 aa7.46□□□□□ -1.21
CLIP4-204ENST00000404424 PAX4O43316 350 aa7.46□□□□□ -1.21
CLIP4-204ENST00000404424 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.21
CLIP4-204ENST00000404424 EPG5Q9HCE0 2579 aa7.46□□□□□ -1.21
CLIP4-204ENST00000404424 ZFYVE26Q68DK2 2539 aa7.46□□□□□ -1.21
CLIP4-204ENST00000404424 A0A087WYN8 130 aa7.46□□□□□ -1.22
CLIP4-204ENST00000404424 CXCL5P42830 114 aa7.46□□□□□ -1.22
CLIP4-204ENST00000404424 C2CD3Q4AC94 2353 aa7.46□□□□□ -1.22
CLIP4-204ENST00000404424 ITPR3Q14573 2671 aa7.45□□□□□ -1.22
CLIP4-204ENST00000404424 LY6G6DO95868 133 aa7.45□□□□□ -1.22
CLIP4-204ENST00000404424 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
CLIP4-204ENST00000404424 NBPF19A0A087WUL8 3843 aa7.45□□□□□ -1.22
CLIP4-204ENST00000404424 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
CLIP4-204ENST00000404424 ATP5G1P05496 136 aa7.44□□□□□ -1.22
CLIP4-204ENST00000404424 XCL1P47992 114 aa7.44□□□□□ -1.22
CLIP4-204ENST00000404424 APCP25054 2843 aa7.44□□□□□ -1.22
CLIP4-204ENST00000404424 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
CLIP4-204ENST00000404424 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms