RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 C5orf52A6NGY3 159 aa22.02■■□□□ 1.12
CSNK1E-204ENST00000403904 TRAV12-1A0A0B4J245 112 aa22.01■■□□□ 1.11
CSNK1E-204ENST00000403904 LECT2O14960 151 aa22.01■■□□□ 1.11
CSNK1E-204ENST00000403904 S100A2P29034 98 aa22.01■■□□□ 1.11
CSNK1E-204ENST00000403904 MAP1LC3CQ9BXW4 147 aa22.01■■□□□ 1.11
CSNK1E-204ENST00000403904 IGHV3OR16-9A0A0B4J2B5 98 aa22■■□□□ 1.11
CSNK1E-204ENST00000403904 C5orf38Q86SI9 138 aa21.99■■□□□ 1.11
CSNK1E-204ENST00000403904 LRCOL1A6NCL2 159 aa21.99■■□□□ 1.11
CSNK1E-204ENST00000403904 SEC11AP67812 179 aa21.99■■□□□ 1.11
CSNK1E-204ENST00000403904 WFDC2Q14508 124 aa21.99■■□□□ 1.11
CSNK1E-204ENST00000403904 CHTOPQ9Y3Y2 248 aaKnown RBP21.99■■□□□ 1.11
CSNK1E-204ENST00000403904 HIST1H2BLQ99880 126 aa21.98■■□□□ 1.11
CSNK1E-204ENST00000403904 GEMIN7Q9H840 131 aaKnown RBP21.98■■□□□ 1.11
CSNK1E-204ENST00000403904 TINCRA0A1B0GVN0 87 aa21.97■■□□□ 1.11
CSNK1E-204ENST00000403904 COX7A2LO14548 114 aa21.97■■□□□ 1.11
CSNK1E-204ENST00000403904 HERVK_113P63121 156 aa21.97■■□□□ 1.11
CSNK1E-204ENST00000403904 IGLV4-69A0A075B6H9 119 aa21.96■■□□□ 1.11
CSNK1E-204ENST00000403904 LINC00336Q6ZUF6 198 aa21.95■■□□□ 1.11
CSNK1E-204ENST00000403904 A0A087WTM6 91 aa21.95■■□□□ 1.1
CSNK1E-204ENST00000403904 USP17L23D6RBM5 183 aa21.95■■□□□ 1.1
CSNK1E-204ENST00000403904 IGLC3P0DOY3 106 aa21.95■■□□□ 1.1
CSNK1E-204ENST00000403904 ODF1Q14990 250 aa21.95■■□□□ 1.1
CSNK1E-204ENST00000403904 MRPL35Q9NZE8 188 aaKnown RBP21.95■■□□□ 1.1
CSNK1E-204ENST00000403904 SYS1-DBNDD2H3BUS1 97 aa21.93■■□□□ 1.1
CSNK1E-204ENST00000403904 CHAC1Q9BUX1 264 aa21.93■■□□□ 1.1
CSNK1E-204ENST00000403904 CDKN2A-AS1Q9UH64 79 aa21.93■■□□□ 1.1
CSNK1E-204ENST00000403904 C3orf79P0CE67 100 aa21.92■■□□□ 1.1
CSNK1E-204ENST00000403904 MALP21145 153 aa21.92■■□□□ 1.1
CSNK1E-204ENST00000403904 F8VRH5 84 aa21.91■■□□□ 1.1
CSNK1E-204ENST00000403904 KRTDAPP60985 99 aa21.91■■□□□ 1.1
CSNK1E-204ENST00000403904 LINC00469Q8N7U9 141 aa21.91■■□□□ 1.1
CSNK1E-204ENST00000403904 DNAH11Q96DT5 4516 aa21.91■■□□□ 1.1
CSNK1E-204ENST00000403904 A0A087WZ39 114 aa21.91■■□□□ 1.1
CSNK1E-204ENST00000403904 C11orf86A6NJI1 115 aa21.9■■□□□ 1.1
CSNK1E-204ENST00000403904 SPATA12Q7Z6I5 190 aa21.9■■□□□ 1.1
CSNK1E-204ENST00000403904 C15orf56Q8N910 161 aa21.9■■□□□ 1.1
CSNK1E-204ENST00000403904 PMCHL2Q9BQD1 86 aa21.9■■□□□ 1.1
CSNK1E-204ENST00000403904 IGLV5-45A0A087WSX0 123 aa21.88■■□□□ 1.09
CSNK1E-204ENST00000403904 PKD1P98161 4303 aa21.88■■□□□ 1.09
CSNK1E-204ENST00000403904 CFAP161Q6P656 301 aa21.87■■□□□ 1.09
CSNK1E-204ENST00000403904 IGHV1-58A0A0C4DH39 117 aa21.86■■□□□ 1.09
CSNK1E-204ENST00000403904 PET117Q6UWS5 81 aa21.86■■□□□ 1.09
CSNK1E-204ENST00000403904 ZNF22P17026 224 aaPredicted RBP21.85■■□□□ 1.09
CSNK1E-204ENST00000403904 EREGO14944 169 aa21.84■■□□□ 1.09
CSNK1E-204ENST00000403904 HIGD2BQ4VC39 106 aa21.84■■□□□ 1.09
CSNK1E-204ENST00000403904 Q8N814 137 aa21.84■■□□□ 1.09
CSNK1E-204ENST00000403904 APOMO95445 188 aa21.82■■□□□ 1.08
CSNK1E-204ENST00000403904 TMEM170BQ5T4T1 132 aa21.82■■□□□ 1.08
CSNK1E-204ENST00000403904 hDV102S1A0JD36 115 aa21.81■■□□□ 1.08
CSNK1E-204ENST00000403904 C14orf177Q52M58 125 aa21.81■■□□□ 1.08
CSNK1E-204ENST00000403904 LINC01545Q5VT33 79 aa21.81■■□□□ 1.08
CSNK1E-204ENST00000403904 LINC01561Q8N1V8 128 aa21.81■■□□□ 1.08
CSNK1E-204ENST00000403904 IGHV3-64A0A075B6Q5 118 aa21.8■■□□□ 1.08
CSNK1E-204ENST00000403904 DPM2O94777 84 aa21.8■■□□□ 1.08
CSNK1E-204ENST00000403904 ORAOV1Q8WV07 137 aa21.8■■□□□ 1.08
CSNK1E-204ENST00000403904 IGLV2-33A0A075B6J2 118 aaPredicted RBP21.79■■□□□ 1.08
CSNK1E-204ENST00000403904 H3BRM9 83 aa21.79■■□□□ 1.08
CSNK1E-204ENST00000403904 SPINK8P0C7L1 97 aa21.79■■□□□ 1.08
CSNK1E-204ENST00000403904 PLNP26678 52 aa21.79■■□□□ 1.08
CSNK1E-204ENST00000403904 LINC00526Q96FQ7 95 aa21.79■■□□□ 1.08
CSNK1E-204ENST00000403904 GVQW2A0A096LPI5 108 aaPredicted RBP21.78■■□□□ 1.08
CSNK1E-204ENST00000403904 HECTD4Q9Y4D8 3996 aa21.78■■□□□ 1.08
CSNK1E-204ENST00000403904 SMIM1B2RUZ4 78 aa21.78■■□□□ 1.08
CSNK1E-204ENST00000403904 IGKCP01834 107 aa21.78■■□□□ 1.08
CSNK1E-204ENST00000403904 FUSP35637 526 aaKnown RBP eCLIP21.76■■□□□ 1.07
CSNK1E-204ENST00000403904 OR10D4PQ8NGN7 298 aa21.76■■□□□ 1.07
CSNK1E-204ENST00000403904 ZNF561-AS1K7EIQ3 104 aa21.74■■□□□ 1.07
CSNK1E-204ENST00000403904 SPAG11BQ08648 103 aa21.74■■□□□ 1.07
CSNK1E-204ENST00000403904 A0A1B0GVY2 172 aa21.74■■□□□ 1.07
CSNK1E-204ENST00000403904 KRTAP10-2P60368 255 aa21.73■■□□□ 1.07
CSNK1E-204ENST00000403904 TOMM7Q9P0U1 55 aa21.72■■□□□ 1.07
CSNK1E-204ENST00000403904 C20orf202A1L168 122 aa21.71■■□□□ 1.07
CSNK1E-204ENST00000403904 TMEM223A0PJW6 202 aa21.7■■□□□ 1.06
CSNK1E-204ENST00000403904 DNAH5Q8TE73 4624 aa21.7■■□□□ 1.06
CSNK1E-204ENST00000403904 SLPIP03973 132 aa21.7■■□□□ 1.06
CSNK1E-204ENST00000403904 KIAA0087Q14695 138 aa21.7■■□□□ 1.06
CSNK1E-204ENST00000403904 NTN5Q8WTR8 489 aaPredicted RBP21.68■■□□□ 1.06
CSNK1E-204ENST00000403904 PKHD1P08F94 4074 aa21.66■■□□□ 1.06
CSNK1E-204ENST00000403904 IGLV5-39A0A0G2JS06 123 aa21.66■■□□□ 1.06
CSNK1E-204ENST00000403904 PRSS2P07478 247 aa21.66■■□□□ 1.06
CSNK1E-204ENST00000403904 Q8IZM0 81 aa21.65■■□□□ 1.06
CSNK1E-204ENST00000403904 C6orf226Q5I0X4 101 aa21.65■■□□□ 1.06
CSNK1E-204ENST00000403904 COX7B2Q8TF08 81 aa21.65■■□□□ 1.06
CSNK1E-204ENST00000403904 C2orf48Q96LS8 159 aa21.64■■□□□ 1.05
CSNK1E-204ENST00000403904 PGPEP1Q9NXJ5 209 aa21.64■■□□□ 1.05
CSNK1E-204ENST00000403904 IGLV5-52A0A0A0MRZ9 124 aa21.63■■□□□ 1.05
CSNK1E-204ENST00000403904 CNBPP62633 177 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-204ENST00000403904 ATOH7Q8N100 152 aa21.63■■□□□ 1.05
CSNK1E-204ENST00000403904 CAMK2N2Q96S95 79 aa21.63■■□□□ 1.05
CSNK1E-204ENST00000403904 C2orf82Q6UX34 121 aa21.61■■□□□ 1.05
CSNK1E-204ENST00000403904 SCGB1D1O95968 90 aa21.6■■□□□ 1.05
CSNK1E-204ENST00000403904 SYCNQ0VAF6 134 aa21.6■■□□□ 1.05
CSNK1E-204ENST00000403904 Q6ZRU5 148 aa21.59■■□□□ 1.05
CSNK1E-204ENST00000403904 STPG4Q8N801 248 aa21.59■■□□□ 1.05
CSNK1E-204ENST00000403904 TRAV16A0A0A6YYK6 109 aaPredicted RBP21.58■■□□□ 1.05
CSNK1E-204ENST00000403904 CKS1BP61024 79 aa21.58■■□□□ 1.05
CSNK1E-204ENST00000403904 HERVK_113P61574 105 aa21.58■■□□□ 1.05
CSNK1E-204ENST00000403904 LINC01620Q4KN68 170 aa21.57■■□□□ 1.04
CSNK1E-204ENST00000403904 C10orf25Q5T742 122 aa21.57■■□□□ 1.04
CSNK1E-204ENST00000403904 UNQ6190/PRO20217Q6UXQ8 127 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms