RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 LRRK2Q5S007 2527 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 CENPEQ02224 2701 aa4.78□□□□□ -1.64
CSNK2A1-204ENST00000400227 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 CCL24O00175 119 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 GAGE5Q13069 117 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 GAGE6Q13070 117 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 CARD19Q96LW7 228 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 SIGMAR1Q99720 223 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 NDUFA12Q9UI09 145 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 CREBBPQ92793 2442 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 APCP25054 2843 aa4.77□□□□□ -1.65
CSNK2A1-204ENST00000400227 NAV2Q8IVL1 2488 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 ABCA12Q86UK0 2595 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 M0QXV9 152 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 TIMM17BO60830 172 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 SPINK8P0C7L1 97 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 SCGB1A1P11684 91 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 KRTAP24-1Q3LI83 254 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 ZFAND6Q6FIF0 208 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 STHQ8IWL8 128 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 ZNF418Q8TF45 676 aaPredicted RBP4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 PPDPFLQ8WWR9 84 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 GTSF1LQ9H1H1 148 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 TENM4Q6N022 2769 aa4.76□□□□□ -1.65
CSNK2A1-204ENST00000400227 ITPR3Q14573 2671 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 IGHV3OR16-12A0A075B7B8 117 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TRAV4A0A0B4J268 109 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TRBV10-1A0A0K0K1A3 114 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 NDUFA1O15239 70 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 GIG44P09565 113 aaPredicted RBP4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 SCGB1C2P0DMR2 95 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 MIAQ16674 131 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TEN1Q86WV5 123 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TMEM101Q96IK0 257 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 C16orf95Q9H693 158 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 GEMIN7Q9H840 131 aaKnown RBP4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 WNK1Q9H4A3 2382 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 TRBV30A0A0K0K1B3 111 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 K7EQD1 137 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 CMC4P56277 68 aaPredicted RBP4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 COX6A2Q02221 97 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 Q6ZTI0 123 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 ANKRD29Q8N6D5 301 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
CSNK2A1-204ENST00000400227 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 MYO9AB2RTY4 2548 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 CYSRT1A8MQ03 144 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 H7C2G1 150 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 LINC00694P0DN24 101 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 IFITM1P13164 125 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 DAZ2Q13117 558 aaKnown RBP4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 DAZ4Q86SG3 579 aaKnown RBP4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 DAZ3Q9NR90 486 aaKnown RBP4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 YAE1D1Q9NRH1 226 aa4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 CSDC2Q9Y534 153 aaKnown RBP4.74□□□□□ -1.65
CSNK2A1-204ENST00000400227 C9JAW5 83 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 SLC25A20O43772 301 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 HERVK_113P63121 156 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 SMAGPQ0VAQ4 97 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 LINC01620Q4KN68 170 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 LINC01006Q8NI28 216 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 ICOSQ9Y6W8 199 aa4.73□□□□□ -1.65
CSNK2A1-204ENST00000400227 SMIM1B2RUZ4 78 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 F5H768 121 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 IGLV1-51P01701 117 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 Q1RN00 199 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 OVOL2Q9BRP0 275 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 PDZD2O15018 2839 aa4.72□□□□□ -1.65
CSNK2A1-204ENST00000400227 TRBV10-2A0A0K0K1G8 114 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 NDUFA7O95182 113 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 CSNK1G2-AS1Q8NCQ2 148 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 C16orf74Q96GX8 76 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 ZNF625Q96I27 306 aaPredicted RBP4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 WFDC10AQ9H1F0 79 aa4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 FLNBO75369 2602 aaKnown RBP4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 SONP18583 2426 aaKnown RBP4.71□□□□□ -1.66
CSNK2A1-204ENST00000400227 NF1P21359 2839 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 CIDEAO60543 219 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 RPL35AP18077 110 aaKnown RBP4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 FLNAP21333 2647 aaKnown RBP4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 RPL13AP40429 203 aaKnown RBP4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 NPC2P61916 151 aa4.7□□□□□ -1.66
CSNK2A1-204ENST00000400227 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms