RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 RBMY1DP0C7P1 496 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 PSMB8P28062 276 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 DEFB112Q30KQ8 113 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 PFN2P35080 140 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 DEFB121Q5J5C9 76 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 LINC00158P58513 81 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 ABCA12Q86UK0 2595 aa7.09□□□□□ -1.27
PTCHD4-202ENST00000398738 UQCRQO14949 82 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 ACYP1P07311 99 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 USP24Q9UPU5 2620 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 MXRA5Q9NR99 2828 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 A0A1B0GX51 115 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 CRPP02741 224 aa7.08□□□□□ -1.28
PTCHD4-202ENST00000398738 A0A087WYN8 130 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 CCL19Q99731 98 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 NCR3O14931 201 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 MSMBP08118 114 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC01600Q96MT4 127 aa7.07□□□□□ -1.28
PTCHD4-202ENST00000398738 LRRK2Q5S007 2527 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 PEMTQ9UBM1 199 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 TIMM17BO60830 172 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 Q8N3U1 123 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 Q96MF0 132 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
PTCHD4-202ENST00000398738 NF1P21359 2839 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LECT2O14960 151 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 PAX4O43316 350 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00526Q96FQ7 95 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 UBE2L6O14933 153 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 GNLYP22749 145 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 HIST2H2BCQ6DN03 193 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 COX7CP15954 63 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC01356Q8N9X3 169 aa7.05□□□□□ -1.28
PTCHD4-202ENST00000398738 NBEAL2Q6ZNJ1 2754 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 TRACP01848 142 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 Q6ZTI0 123 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 DSCR8Q96T75 97 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 LOC100131303A0A0U1RQF7 123 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 BEAN1Q3B7T3 259 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 C10orf105Q8TEF2 133 aa7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
PTCHD4-202ENST00000398738 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
PTCHD4-202ENST00000398738 PLA2G2AP14555 144 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 J3KT08 172 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 TEX15Q9BXT5 2789 aa7.02□□□□□ -1.29
PTCHD4-202ENST00000398738 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TRAV13-2A0A0B4J235 113 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 INSP01308 110 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 BBC3Q96PG8 261 aaPredicted RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 NOP10Q9NPE3 64 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 HILS1P60008 231 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TRGV2A0A075B6R0 118 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 TMEM89A2RUT3 159 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 ATOX1O00244 68 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
PTCHD4-202ENST00000398738 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 C2orf48Q96LS8 159 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 CFAP46Q8IYW2 2715 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 MTORP42345 2549 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 B4DSR2 109 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 CCL18P55774 89 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 COX7B2Q8TF08 81 aa7□□□□□ -1.29
PTCHD4-202ENST00000398738 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 F5H768 121 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 CXCL5P42830 114 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 STHQ8IWL8 128 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 PKD1L2Q7Z442 2459 aa6.99□□□□□ -1.29
PTCHD4-202ENST00000398738 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms