RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
SOCS6-201ENST00000397942 RMI2Q96E14 147 aa9.1□□□□□ -0.95
SOCS6-201ENST00000397942 TRACP01848 142 aa9.1□□□□□ -0.95
SOCS6-201ENST00000397942 MRPS36P82909 103 aaKnown RBP9.09□□□□□ -0.95
SOCS6-201ENST00000397942 RNF183Q96D59 192 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 KRTAP10-9P60411 292 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 ATOX1O00244 68 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 LINC00482Q8N8I6 264 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
SOCS6-201ENST00000397942 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
SOCS6-201ENST00000397942 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
SOCS6-201ENST00000397942 REG3AQ06141 175 aa9.08□□□□□ -0.96
SOCS6-201ENST00000397942 FLNCQ14315 2725 aa9.08□□□□□ -0.96
SOCS6-201ENST00000397942 RBMY1FQ15415 496 aaKnown RBP9.07□□□□□ -0.96
SOCS6-201ENST00000397942 UNC79Q9P2D8 2635 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 SMIM9A6NGZ8 99 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 CCL18P55774 89 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 TMEM256-PLSCR3K7ERE1 68 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
SOCS6-201ENST00000397942 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
SOCS6-201ENST00000397942 NCR3O14931 201 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 LAMA1P25391 3075 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 ZNF843Q8N446 348 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 TIMM17BO60830 172 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 BRI3O95415 125 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 NDUFA7O95182 113 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
SOCS6-201ENST00000397942 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
SOCS6-201ENST00000397942 XAGE1AQ9HD64 81 aa9.06□□□□□ -0.96
SOCS6-201ENST00000397942 LST1O00453 97 aa9.05□□□□□ -0.96
SOCS6-201ENST00000397942 XGP55808 180 aa9.05□□□□□ -0.96
SOCS6-201ENST00000397942 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
SOCS6-201ENST00000397942 UBE2BP63146 152 aa9.05□□□□□ -0.96
SOCS6-201ENST00000397942 DIRC1Q969H9 104 aa9.05□□□□□ -0.96
SOCS6-201ENST00000397942 BBC3Q96PG8 261 aaPredicted RBP9.05□□□□□ -0.96
SOCS6-201ENST00000397942 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 ZNF580Q9UK33 172 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 CELSR3Q9NYQ7 3312 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 SLPIP03973 132 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 NREPQ16612 68 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 C6orf99Q4VX62 202 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
SOCS6-201ENST00000397942 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
SOCS6-201ENST00000397942 KIF25-AS1Q9Y6Z4 181 aa9.03□□□□□ -0.96
SOCS6-201ENST00000397942 IGHV4-28A0A0C4DH34 117 aa9.03□□□□□ -0.96
SOCS6-201ENST00000397942 H7C423 109 aa9.03□□□□□ -0.96
SOCS6-201ENST00000397942 DMXL2Q8TDJ6 3036 aa9.03□□□□□ -0.96
SOCS6-201ENST00000397942 UBE2D3P61077 147 aa9.02□□□□□ -0.97
SOCS6-201ENST00000397942 UBE2D2P62837 147 aa9.02□□□□□ -0.97
SOCS6-201ENST00000397942 BOD1L1Q8NFC6 3051 aa9.02□□□□□ -0.97
SOCS6-201ENST00000397942 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
SOCS6-201ENST00000397942 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
SOCS6-201ENST00000397942 TACC2O95359 2948 aa9.01□□□□□ -0.97
SOCS6-201ENST00000397942 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
SOCS6-201ENST00000397942 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
SOCS6-201ENST00000397942 SPATA25Q9BR10 227 aa9□□□□□ -0.97
SOCS6-201ENST00000397942 FRYLO94915 3013 aa9□□□□□ -0.97
SOCS6-201ENST00000397942 PDE6GP18545 87 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 VCANP13611 3396 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 LINC00694P0DN24 101 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 ADAMTSL4-AS1Q5T5F5 129 aa8.99□□□□□ -0.97
SOCS6-201ENST00000397942 BAHCC1Q9P281 2608 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 HILS1P60008 231 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 AMELXQ99217 191 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 LINC00315P59091 139 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 CD164L2Q6UWJ8 174 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 COX7BP24311 80 aa8.98□□□□□ -0.97
SOCS6-201ENST00000397942 NSD1Q96L73 2696 aaPredicted RBP8.97□□□□□ -0.97
SOCS6-201ENST00000397942 MIFP14174 115 aa8.97□□□□□ -0.97
SOCS6-201ENST00000397942 CHCHD7Q9BUK0 85 aa8.97□□□□□ -0.97
SOCS6-201ENST00000397942 NBEAL2Q6ZNJ1 2754 aa8.96□□□□□ -0.97
SOCS6-201ENST00000397942 Q6ZQY7 126 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 Q6ZSN1 163 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 ADGRG4Q8IZF6 3080 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 IGLV1-51P01701 117 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 H3BQ85 93 aa8.95□□□□□ -0.98
SOCS6-201ENST00000397942 COL4A2P08572 1712 aa8.94□□□□□ -0.98
SOCS6-201ENST00000397942 UQCRQO14949 82 aa8.94□□□□□ -0.98
SOCS6-201ENST00000397942 BEAN1Q3B7T3 259 aa8.94□□□□□ -0.98
SOCS6-201ENST00000397942 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
SOCS6-201ENST00000397942 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 FAM110AQ9BQ89 295 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 ITPR1Q14643 2758 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 PCSK5Q92824 1860 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
SOCS6-201ENST00000397942 ZZEF1O43149 2961 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 COX6A2Q02221 97 aa8.93□□□□□ -0.98
SOCS6-201ENST00000397942 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
SOCS6-201ENST00000397942 ATMQ13315 3056 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms