RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 LINC01546A6NGU7 62 aa11.25□□□□□ -0.61
GNE-202ENST00000396594 A0A1B0GW54 56 aa11.24□□□□□ -0.61
GNE-202ENST00000396594 FAM236DA0A1B0GTK5 79 aa11.24□□□□□ -0.61
GNE-202ENST00000396594 FAM236CP0DP71 79 aa11.24□□□□□ -0.61
GNE-202ENST00000396594 PCNX3Q9H6A9 2034 aa11.23□□□□□ -0.61
GNE-202ENST00000396594 SERP2Q8N6R1 65 aa11.23□□□□□ -0.61
GNE-202ENST00000396594 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
GNE-202ENST00000396594 NANOS2P60321 138 aaKnown RBP11.22□□□□□ -0.61
GNE-202ENST00000396594 ZFHX2Q9C0A1 2572 aaPredicted RBP11.22□□□□□ -0.61
GNE-202ENST00000396594 TEX49A0A1B0GTD5 131 aa11.22□□□□□ -0.61
GNE-202ENST00000396594 REG3GQ6UW15 175 aa11.22□□□□□ -0.61
GNE-202ENST00000396594 NDUFC2-KCTD14E9PQ53 114 aa11.22□□□□□ -0.61
GNE-202ENST00000396594 PLCE1Q9P212 2302 aa11.21□□□□□ -0.61
GNE-202ENST00000396594 ABCA1O95477 2261 aa11.21□□□□□ -0.61
GNE-202ENST00000396594 C5orf47Q569G3 176 aa11.2□□□□□ -0.62
GNE-202ENST00000396594 EXPH5Q8NEV8 1989 aa11.2□□□□□ -0.62
GNE-202ENST00000396594 LOC100131303A0A0U1RQF7 123 aa11.2□□□□□ -0.62
GNE-202ENST00000396594 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
GNE-202ENST00000396594 RPL37AP8A6NKH3 93 aa11.19□□□□□ -0.62
GNE-202ENST00000396594 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
GNE-202ENST00000396594 NBASA2RRP1 2371 aa11.18□□□□□ -0.62
GNE-202ENST00000396594 LY6G6CO95867 125 aa11.18□□□□□ -0.62
GNE-202ENST00000396594 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 FAM208BQ5VWN6 2430 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 KRTAP10-9P60411 292 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
GNE-202ENST00000396594 Q8N814 137 aa11.16□□□□□ -0.62
GNE-202ENST00000396594 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
GNE-202ENST00000396594 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
GNE-202ENST00000396594 A0A1W2PPR1 153 aa11.15□□□□□ -0.62
GNE-202ENST00000396594 POM121L12Q8N7R1 296 aa11.15□□□□□ -0.62
GNE-202ENST00000396594 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.62
GNE-202ENST00000396594 PTPRQQ9UMZ3 2332 aa11.15□□□□□ -0.62
GNE-202ENST00000396594 LIMD2Q9BT23 127 aa11.15□□□□□ -0.62
GNE-202ENST00000396594 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.63
GNE-202ENST00000396594 LYPD5Q6UWN5 251 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 SDIM1Q6ZPB5 146 aa11.14□□□□□ -0.63
GNE-202ENST00000396594 HCFC1P51610 2035 aa11.13□□□□□ -0.63
GNE-202ENST00000396594 LINC01556Q5JQF7 62 aa11.13□□□□□ -0.63
GNE-202ENST00000396594 FSHBP01225 129 aa11.13□□□□□ -0.63
GNE-202ENST00000396594 Q8N9L7 120 aa11.13□□□□□ -0.63
GNE-202ENST00000396594 C20orf197Q8N268 126 aa11.12□□□□□ -0.63
GNE-202ENST00000396594 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
GNE-202ENST00000396594 SLPIP03973 132 aa11.12□□□□□ -0.63
GNE-202ENST00000396594 ACACBO00763 2458 aa11.12□□□□□ -0.63
GNE-202ENST00000396594 COX7CP15954 63 aa11.11□□□□□ -0.63
GNE-202ENST00000396594 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
GNE-202ENST00000396594 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
GNE-202ENST00000396594 Q6ZTC4 211 aa11.1□□□□□ -0.63
GNE-202ENST00000396594 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
GNE-202ENST00000396594 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
GNE-202ENST00000396594 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
GNE-202ENST00000396594 RAI1Q7Z5J4 1906 aaPredicted RBP11.09□□□□□ -0.63
GNE-202ENST00000396594 TRBV10-3A0A0K0K1G6 114 aa11.09□□□□□ -0.63
GNE-202ENST00000396594 MT-ATP8P03928 68 aa11.08□□□□□ -0.63
GNE-202ENST00000396594 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.63
GNE-202ENST00000396594 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
GNE-202ENST00000396594 SERP1Q9Y6X1 66 aa11.08□□□□□ -0.64
GNE-202ENST00000396594 IGLV5-39A0A0G2JS06 123 aa11.08□□□□□ -0.64
GNE-202ENST00000396594 BCE1O60756 84 aa11.08□□□□□ -0.64
GNE-202ENST00000396594 NAV3Q8IVL0 2385 aa11.07□□□□□ -0.64
GNE-202ENST00000396594 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
GNE-202ENST00000396594 TANC2Q9HCD6 1990 aa11.06□□□□□ -0.64
GNE-202ENST00000396594 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
GNE-202ENST00000396594 WFDC10BQ8IUB3 73 aa11.05□□□□□ -0.64
GNE-202ENST00000396594 LINC00310P59036 64 aa11.05□□□□□ -0.64
GNE-202ENST00000396594 A8MZ25 164 aa11.04□□□□□ -0.64
GNE-202ENST00000396594 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
GNE-202ENST00000396594 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
GNE-202ENST00000396594 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
GNE-202ENST00000396594 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
GNE-202ENST00000396594 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
GNE-202ENST00000396594 GAS8-AS1O95177 125 aa11.02□□□□□ -0.65
GNE-202ENST00000396594 M0R2N4 97 aa11.01□□□□□ -0.65
GNE-202ENST00000396594 A0A096LNI7 61 aa11.01□□□□□ -0.65
GNE-202ENST00000396594 COX6A2Q02221 97 aa11.01□□□□□ -0.65
GNE-202ENST00000396594 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
GNE-202ENST00000396594 CXCL6P80162 114 aa11□□□□□ -0.65
GNE-202ENST00000396594 TNCP24821 2201 aa11□□□□□ -0.65
GNE-202ENST00000396594 MED13LQ71F56 2210 aa11□□□□□ -0.65
GNE-202ENST00000396594 SMR3AQ99954 134 aa10.99□□□□□ -0.65
GNE-202ENST00000396594 A0A096LNJ9 63 aa10.99□□□□□ -0.65
GNE-202ENST00000396594 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
GNE-202ENST00000396594 Q9BRP9 147 aa10.99□□□□□ -0.65
GNE-202ENST00000396594 EDN2P20800 178 aa10.98□□□□□ -0.65
GNE-202ENST00000396594 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
GNE-202ENST00000396594 RETNQ9HD89 108 aa10.97□□□□□ -0.65
GNE-202ENST00000396594 EML5Q05BV3 1969 aa10.97□□□□□ -0.65
GNE-202ENST00000396594 NOTCH3Q9UM47 2321 aa10.96□□□□□ -0.65
GNE-202ENST00000396594 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.66
GNE-202ENST00000396594 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
GNE-202ENST00000396594 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms