RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 UNC80Q8N2C7 3258 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 COL4A2P08572 1712 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 ZGRF1Q86YA3 2104 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 ZFHX2Q9C0A1 2572 aaPredicted RBP2.62□□□□□ -1.99
GABPB1-204ENST00000396464 MPDZO75970 2070 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 A0A0G2JND7 137 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 TRBV6-4A0A1B0GX49 114 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 A0A1W2PPM0 123 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 LOC730098B7Z3J9 87 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 H7BZZ5 65 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 FAM167A-AS1Q96KT0 104 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 PRO1854Q9UHT4 67 aa2.62□□□□□ -1.99
GABPB1-204ENST00000396464 PRRC2BQ5JSZ5 2229 aaKnown RBP2.62□□□□□ -1.99
GABPB1-204ENST00000396464 TRIOBPQ9H2D6 2365 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 H3BRN7 92 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 PPYP01298 95 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 IGLV3-1P01715 115 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 IGLC2P0DOY2 106 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 IGLC3P0DOY3 106 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 UBE2D3P61077 147 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 UBE2D2P62837 147 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 Q5VV11 94 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 DEFB119Q8N690 84 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 Q8N6K4 173 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 COL6A3P12111 3177 aa2.61□□□□□ -1.99
GABPB1-204ENST00000396464 UNC13CQ8NB66 2214 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 CLPSL1A2RUU4 121 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 CHKB-CPT1BH3BT56 60 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 CCL22O00626 93 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 RNASE3P12724 160 aaKnown RBP2.6□□□□□ -1.99
GABPB1-204ENST00000396464 BVES-AS1Q5T3Y7 98 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 SFTA2Q6UW10 78 aa2.6□□□□□ -1.99
GABPB1-204ENST00000396464 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
GABPB1-204ENST00000396464 IGKV2-24A0A0C4DH68 120 aa2.59□□□□□ -1.99
GABPB1-204ENST00000396464 PDE6GP18545 87 aa2.59□□□□□ -1.99
GABPB1-204ENST00000396464 C10orf55Q5SWW7 151 aa2.59□□□□□ -1.99
GABPB1-204ENST00000396464 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
GABPB1-204ENST00000396464 MYO7AQ13402 2215 aa2.59□□□□□ -1.99
GABPB1-204ENST00000396464 TRGV4A0A0C4DH28 118 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 JMJD7-PLA2G4BH0Y9G9 81 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 CFDP00746 253 aaPredicted RBP2.59□□□□□ -2
GABPB1-204ENST00000396464 SPINT3P49223 89 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 EDDM3BP56851 147 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 TVP23CQ96ET8 276 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 WFDC10AQ9H1F0 79 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 KLK9Q9UKQ9 250 aa2.59□□□□□ -2
GABPB1-204ENST00000396464 LOC285095A0A1B0GVY8 99 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 HIGD1CA8MV81 97 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 ESPL1Q14674 2120 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 VMO1Q7Z5L0 202 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 FAM223AQ8IWN6 122 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 C20orf197Q8N268 126 aa2.58□□□□□ -2
GABPB1-204ENST00000396464 CR1P17927 2039 aa2.57□□□□□ -2
GABPB1-204ENST00000396464 H3BUT2 72 aa2.57□□□□□ -2
GABPB1-204ENST00000396464 ZNF56Q15929 161 aa2.57□□□□□ -2
GABPB1-204ENST00000396464 IGFL1Q6UW32 110 aa2.57□□□□□ -2
GABPB1-204ENST00000396464 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 KANTRA0A1W2PQU2 76 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 SSBP1Q04837 148 aaKnown RBP2.56□□□□□ -2
GABPB1-204ENST00000396464 KLKP1Q107X0 134 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 PMCHL1Q16048 86 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 DEFB133Q30KQ1 61 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 CDC42SE2Q9NRR3 84 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 NDUFA4L2Q9NRX3 87 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 TRIOO75962 3097 aa2.56□□□□□ -2
GABPB1-204ENST00000396464 SPTBN5Q9NRC6 3674 aaKnown RBP2.55□□□□□ -2
GABPB1-204ENST00000396464 TNRC6BQ9UPQ9 1833 aaKnown RBP2.55□□□□□ -2
GABPB1-204ENST00000396464 TMEM14DPA8MWL7 114 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 C10orf142B7Z368 130 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 BCE1O60756 84 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 COX6CP09669 75 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 EFNA4P52798 201 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
GABPB1-204ENST00000396464 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 DYNLRB1Q9NP97 96 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 VCANP13611 3396 aa2.55□□□□□ -2
GABPB1-204ENST00000396464 BRWD1Q9NSI6 2320 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 TRBV6-7A0A0A0MS04 114 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 SPTY2D1-AS1A0A0U1RR47 76 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 DNAL4O96015 105 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 IGLV3-19P01714 112 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
GABPB1-204ENST00000396464 GNGT1P63211 74 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 COX14Q96I36 57 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 CYYR1Q96J86 154 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 LINC01600Q96MT4 127 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 TXNDC17Q9BRA2 123 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 WDFY4Q6ZS81 3184 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 FREM1Q5H8C1 2179 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 ARFGEF3Q5TH69 2177 aa2.54□□□□□ -2
GABPB1-204ENST00000396464 TRBV25-1A0A075B6N4 114 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 IGKV3D-7A0A0C4DH55 119 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 IGKV3OR2-268A0A0C4DH90 116 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 F2Z2F3 143 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 HMGN4O00479 90 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 SMIM11AP58511 58 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 SPATA45Q537H7 98 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 COA5Q86WW8 74 aa2.53□□□□□ -2
GABPB1-204ENST00000396464 PCDH15Q96QU1 1955 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms