RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TMEM101Q96IK0 257 aa10.46□□□□□ -0.74
SCAF11-204ENST00000395454 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 A0A1B0GWB2 263 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 PAX4O43316 350 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 SCGB1D4Q6XE38 83 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 LINC00469Q8N7U9 141 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 HIST1H4GQ99525 98 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
SCAF11-204ENST00000395454 K7EP13 123 aa10.44□□□□□ -0.74
SCAF11-204ENST00000395454 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 COX6A2Q02221 97 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 ZFAND6Q6FIF0 208 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 MUC7Q8TAX7 377 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 LYSTQ99698 3801 aa10.43□□□□□ -0.74
SCAF11-204ENST00000395454 CHCHD5Q9BSY4 110 aa10.42□□□□□ -0.74
SCAF11-204ENST00000395454 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 GAGE6Q13070 117 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 IGHV3-64A0A075B6Q5 118 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 SPINK8P0C7L1 97 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 SH2D6Q7Z4S9 175 aa10.41□□□□□ -0.74
SCAF11-204ENST00000395454 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.74
SCAF11-204ENST00000395454 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 A0A0J9YXY3 114 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 IGLL5B9A064 214 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
SCAF11-204ENST00000395454 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.75
SCAF11-204ENST00000395454 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
SCAF11-204ENST00000395454 LITAFQ99732 161 aa10.39□□□□□ -0.75
SCAF11-204ENST00000395454 H3BNG1 76 aa10.39□□□□□ -0.75
SCAF11-204ENST00000395454 NHP2Q9NX24 153 aaKnown RBP10.39□□□□□ -0.75
SCAF11-204ENST00000395454 NDUFA12Q9UI09 145 aa10.39□□□□□ -0.75
SCAF11-204ENST00000395454 TMEM238LA0A1B0GVL6 79 aa10.38□□□□□ -0.75
SCAF11-204ENST00000395454 A6NJY4 79 aa10.38□□□□□ -0.75
SCAF11-204ENST00000395454 NDUFA1O15239 70 aa10.38□□□□□ -0.75
SCAF11-204ENST00000395454 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
SCAF11-204ENST00000395454 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
SCAF11-204ENST00000395454 MRPL23Q16540 153 aaKnown RBP10.38□□□□□ -0.75
SCAF11-204ENST00000395454 TMEM238C9JI98 176 aa10.37□□□□□ -0.75
SCAF11-204ENST00000395454 KLK5Q9Y337 293 aaPredicted RBP10.37□□□□□ -0.75
SCAF11-204ENST00000395454 K7ERJ3 54 aa10.37□□□□□ -0.75
SCAF11-204ENST00000395454 TIMM17BO60830 172 aa10.37□□□□□ -0.75
SCAF11-204ENST00000395454 RBX1P62877 108 aa10.37□□□□□ -0.75
SCAF11-204ENST00000395454 IGHV3OR16-9A0A0B4J2B5 98 aa10.36□□□□□ -0.75
SCAF11-204ENST00000395454 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
SCAF11-204ENST00000395454 CCL25O15444 150 aa10.35□□□□□ -0.75
SCAF11-204ENST00000395454 A0A096LPF7 62 aa10.35□□□□□ -0.75
SCAF11-204ENST00000395454 VAMP3Q15836 100 aa10.35□□□□□ -0.75
SCAF11-204ENST00000395454 SPANXDQ9BXN6 97 aa10.35□□□□□ -0.75
SCAF11-204ENST00000395454 SPANXCQ9NY87 97 aa10.35□□□□□ -0.75
SCAF11-204ENST00000395454 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
SCAF11-204ENST00000395454 H3BUT2 72 aa10.34□□□□□ -0.75
SCAF11-204ENST00000395454 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-204ENST00000395454 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 LELP1Q5T871 98 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 C15orf53Q8NAA6 179 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 A0A087WZ39 114 aa10.33□□□□□ -0.76
SCAF11-204ENST00000395454 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
SCAF11-204ENST00000395454 MIAQ16674 131 aa10.31□□□□□ -0.76
SCAF11-204ENST00000395454 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
SCAF11-204ENST00000395454 RPL24P83731 157 aaKnown RBP10.3□□□□□ -0.76
SCAF11-204ENST00000395454 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
SCAF11-204ENST00000395454 K7EP34 96 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 HERV-K104P63124 156 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 PPDPFQ9H3Y8 114 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 Q9H8V8 135 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 A0A0B4J2C4 111 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 CFC1P0CG37 223 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 FABP2P12104 132 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
SCAF11-204ENST00000395454 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
SCAF11-204ENST00000395454 A4D1N5 150 aa10.28□□□□□ -0.76
SCAF11-204ENST00000395454 IFITM1P13164 125 aa10.28□□□□□ -0.76
SCAF11-204ENST00000395454 SS18Q15532 418 aa10.28□□□□□ -0.76
SCAF11-204ENST00000395454 GTF2H5Q6ZYL4 71 aa10.28□□□□□ -0.76
SCAF11-204ENST00000395454 LYPD5Q6UWN5 251 aa10.27□□□□□ -0.76
SCAF11-204ENST00000395454 GAGE10A6NGK3 116 aa10.27□□□□□ -0.77
SCAF11-204ENST00000395454 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-204ENST00000395454 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
SCAF11-204ENST00000395454 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.26□□□□□ -0.77
SCAF11-204ENST00000395454 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
SCAF11-204ENST00000395454 PRR34Q9NV39 138 aa10.26□□□□□ -0.77
SCAF11-204ENST00000395454 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
SCAF11-204ENST00000395454 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
SCAF11-204ENST00000395454 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms