RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 AVPP01185 164 aa12.18□□□□□ -0.46
PTPA-207ENST00000393370 TMEM86BQ8N661 226 aa12.18□□□□□ -0.46
PTPA-207ENST00000393370 LYPD5Q6UWN5 251 aa12.17□□□□□ -0.46
PTPA-207ENST00000393370 ITPR1Q14643 2758 aa12.16□□□□□ -0.46
PTPA-207ENST00000393370 K7EMT4 169 aa12.16□□□□□ -0.46
PTPA-207ENST00000393370 S100A7L2Q5SY68 101 aa12.16□□□□□ -0.46
PTPA-207ENST00000393370 Q8NA96 180 aa12.16□□□□□ -0.46
PTPA-207ENST00000393370 K7EQG2 157 aa12.15□□□□□ -0.46
PTPA-207ENST00000393370 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
PTPA-207ENST00000393370 C11orf71Q6IPW1 123 aa12.15□□□□□ -0.46
PTPA-207ENST00000393370 FAM19A3Q7Z5A8 133 aa12.15□□□□□ -0.46
PTPA-207ENST00000393370 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.46
PTPA-207ENST00000393370 LY6EQ16553 131 aa12.15□□□□□ -0.47
PTPA-207ENST00000393370 IGHV3-53P01767 116 aa12.14□□□□□ -0.47
PTPA-207ENST00000393370 AKAP6Q13023 2319 aa12.13□□□□□ -0.47
PTPA-207ENST00000393370 CCL18P55774 89 aa12.13□□□□□ -0.47
PTPA-207ENST00000393370 BLCAPP62952 87 aa12.13□□□□□ -0.47
PTPA-207ENST00000393370 H3BUA1 57 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 LINC00158P58513 81 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 SNURFQ9Y675 71 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
PTPA-207ENST00000393370 SMIM26A0A096LP01 95 aa12.11□□□□□ -0.47
PTPA-207ENST00000393370 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
PTPA-207ENST00000393370 RMI2Q96E14 147 aa12.1□□□□□ -0.47
PTPA-207ENST00000393370 TOMM7Q9P0U1 55 aa12.1□□□□□ -0.47
PTPA-207ENST00000393370 SPTAN1Q13813 2472 aaKnown RBP12.09□□□□□ -0.47
PTPA-207ENST00000393370 TRAV7A0A075B6U4 112 aa12.09□□□□□ -0.47
PTPA-207ENST00000393370 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
PTPA-207ENST00000393370 CFHR3Q02985 330 aa12.09□□□□□ -0.47
PTPA-207ENST00000393370 KLKP1Q107X0 134 aa12.09□□□□□ -0.47
PTPA-207ENST00000393370 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
PTPA-207ENST00000393370 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
PTPA-207ENST00000393370 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
PTPA-207ENST00000393370 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 F8WEM9 126 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 PAX4O43316 350 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 CDSNQ15517 529 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 Q6ZTI0 123 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 UBL5Q9BZL1 73 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 A0A0U1RQV1 116 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 JMJD7-PLA2G4BH0Y9G9 81 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
PTPA-207ENST00000393370 BRK1Q8WUW1 75 aa12.06□□□□□ -0.48
PTPA-207ENST00000393370 LMO4P61968 165 aa12.05□□□□□ -0.48
PTPA-207ENST00000393370 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
PTPA-207ENST00000393370 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.484e-6■■■□□ 15.2
PTPA-207ENST00000393370 BPESC1Q9GZL8 116 aa12.03□□□□□ -0.48
PTPA-207ENST00000393370 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
PTPA-207ENST00000393370 H3BUX3 64 aa12.03□□□□□ -0.48
PTPA-207ENST00000393370 SEC61GP60059 68 aa12.02□□□□□ -0.48
PTPA-207ENST00000393370 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.48
PTPA-207ENST00000393370 VPS13CQ709C8 3753 aa12.02□□□□□ -0.48
PTPA-207ENST00000393370 C10orf99Q6UWK7 81 aa12.02□□□□□ -0.49
PTPA-207ENST00000393370 LINC00167Q96N53 147 aa12.02□□□□□ -0.49
PTPA-207ENST00000393370 IGSF10Q6WRI0 2623 aa12.02□□□□□ -0.49
PTPA-207ENST00000393370 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
PTPA-207ENST00000393370 CCL21O00585 134 aa12.01□□□□□ -0.49
PTPA-207ENST00000393370 RNASE1P07998 156 aaKnown RBP12.01□□□□□ -0.49
PTPA-207ENST00000393370 Q8N814 137 aa12.01□□□□□ -0.49
PTPA-207ENST00000393370 CREBBPQ92793 2442 aa12.01□□□□□ -0.49
PTPA-207ENST00000393370 A0A1W2PPR1 153 aa12□□□□□ -0.49
PTPA-207ENST00000393370 TMEM256-PLSCR3K7ERE1 68 aa12□□□□□ -0.49
PTPA-207ENST00000393370 LY6G6DO95868 133 aa12□□□□□ -0.49
PTPA-207ENST00000393370 DEFB131AP59861 70 aa12□□□□□ -0.49
PTPA-207ENST00000393370 C1orf195Q5TG92 126 aa12□□□□□ -0.49
PTPA-207ENST00000393370 V9GYY9 64 aa12□□□□□ -0.49
PTPA-207ENST00000393370 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
PTPA-207ENST00000393370 BCE1O60756 84 aa12□□□□□ -0.49
PTPA-207ENST00000393370 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
PTPA-207ENST00000393370 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
PTPA-207ENST00000393370 A0A096LNT2 108 aa11.99□□□□□ -0.49
PTPA-207ENST00000393370 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
PTPA-207ENST00000393370 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
PTPA-207ENST00000393370 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
PTPA-207ENST00000393370 A6NDX4 124 aa11.98□□□□□ -0.49
PTPA-207ENST00000393370 K7EQD1 137 aa11.98□□□□□ -0.49
PTPA-207ENST00000393370 LINC01547P58512 204 aaPredicted RBP11.98□□□□□ -0.49
PTPA-207ENST00000393370 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
PTPA-207ENST00000393370 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
PTPA-207ENST00000393370 M0R2N4 97 aa11.97□□□□□ -0.49
PTPA-207ENST00000393370 CSMD2Q7Z408 3487 aa11.97□□□□□ -0.49
PTPA-207ENST00000393370 HAMPP81172 84 aa11.96□□□□□ -0.49
PTPA-207ENST00000393370 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.49
PTPA-207ENST00000393370 NANOS2P60321 138 aaKnown RBP11.95□□□□□ -0.5
PTPA-207ENST00000393370 PRR3P79522 188 aaKnown RBP11.95□□□□□ -0.5
PTPA-207ENST00000393370 UBE2L6O14933 153 aa11.95□□□□□ -0.5
PTPA-207ENST00000393370 ABCA2Q9BZC7 2435 aa11.94□□□□□ -0.5
PTPA-207ENST00000393370 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
PTPA-207ENST00000393370 FAM229BQ4G0N7 80 aa11.94□□□□□ -0.5
PTPA-207ENST00000393370 Q6ZQT0 140 aa11.94□□□□□ -0.5
PTPA-207ENST00000393370 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
PTPA-207ENST00000393370 CUBNO60494 3623 aa11.93□□□□□ -0.5
PTPA-207ENST00000393370 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
PTPA-207ENST00000393370 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
PTPA-207ENST00000393370 A8MTW9 85 aa11.92□□□□□ -0.5
PTPA-207ENST00000393370 Q6ZVQ6 151 aa11.92□□□□□ -0.5
PTPA-207ENST00000393370 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
PTPA-207ENST00000393370 CHD6Q8TD26 2715 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms