RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
MKS1-203ENST00000393120 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
MKS1-203ENST00000393120 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
MKS1-203ENST00000393120 GAGE6Q13070 117 aa10.01□□□□□ -0.81
MKS1-203ENST00000393120 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
MKS1-203ENST00000393120 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
MKS1-203ENST00000393120 GYPEP15421 78 aa10□□□□□ -0.81
MKS1-203ENST00000393120 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
MKS1-203ENST00000393120 Q9H8V8 135 aa10□□□□□ -0.81
MKS1-203ENST00000393120 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
MKS1-203ENST00000393120 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
MKS1-203ENST00000393120 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
MKS1-203ENST00000393120 PSMB2P49721 201 aa9.99□□□□□ -0.81
MKS1-203ENST00000393120 HERV-K104P63124 156 aa9.99□□□□□ -0.81
MKS1-203ENST00000393120 DEFB135Q30KP9 77 aa9.99□□□□□ -0.81
MKS1-203ENST00000393120 MIFP14174 115 aa9.98□□□□□ -0.81
MKS1-203ENST00000393120 PCP4P48539 62 aa9.98□□□□□ -0.81
MKS1-203ENST00000393120 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
MKS1-203ENST00000393120 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 TCL1BO95988 128 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 SFTA2Q6UW10 78 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 IGHV4-28A0A0C4DH34 117 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 SCGB1C2P0DMR2 95 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
MKS1-203ENST00000393120 IGHV3OR16-9A0A0B4J2B5 98 aa9.96□□□□□ -0.81
MKS1-203ENST00000393120 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.81
MKS1-203ENST00000393120 PAX4O43316 350 aa9.96□□□□□ -0.81
MKS1-203ENST00000393120 HIVEP1P15822 2718 aa9.96□□□□□ -0.81
MKS1-203ENST00000393120 Q8NAQ8 132 aa9.95□□□□□ -0.82
MKS1-203ENST00000393120 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
MKS1-203ENST00000393120 PRIMA1Q86XR5 153 aa9.95□□□□□ -0.82
MKS1-203ENST00000393120 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
MKS1-203ENST00000393120 A0A087WZ39 114 aa9.94□□□□□ -0.82
MKS1-203ENST00000393120 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
MKS1-203ENST00000393120 IGHV4-30-4P0DP06 118 aa9.94□□□□□ -0.82
MKS1-203ENST00000393120 DAD1P61803 113 aa9.94□□□□□ -0.82
MKS1-203ENST00000393120 SH2D6Q7Z4S9 175 aa9.94□□□□□ -0.82
MKS1-203ENST00000393120 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
MKS1-203ENST00000393120 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
MKS1-203ENST00000393120 LINC00959A0A1B0GUT2 108 aa9.93□□□□□ -0.82
MKS1-203ENST00000393120 J3QR89 54 aa9.93□□□□□ -0.82
MKS1-203ENST00000393120 H7C2G1 150 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 M0QXV9 152 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 Q1RN00 199 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 DAND5Q8N907 189 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 DEFB4AO15263 64 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 ATP5G1P05496 136 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 NPC2P61916 151 aa9.92□□□□□ -0.82
MKS1-203ENST00000393120 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
MKS1-203ENST00000393120 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
MKS1-203ENST00000393120 IGKV3OR2-268A0A0C4DH90 116 aa9.9□□□□□ -0.82
MKS1-203ENST00000393120 TMEM262E9PQX1 116 aa9.9□□□□□ -0.82
MKS1-203ENST00000393120 TRIAP1O43715 76 aa9.9□□□□□ -0.82
MKS1-203ENST00000393120 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
MKS1-203ENST00000393120 SS18Q15532 418 aa9.9□□□□□ -0.83
MKS1-203ENST00000393120 ATXN8Q156A1 80 aa9.9□□□□□ -0.83
MKS1-203ENST00000393120 LINC01600Q96MT4 127 aa9.9□□□□□ -0.83
MKS1-203ENST00000393120 CELA1Q9UNI1 258 aa9.9□□□□□ -0.83
MKS1-203ENST00000393120 COX6CP09669 75 aa9.89□□□□□ -0.83
MKS1-203ENST00000393120 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
MKS1-203ENST00000393120 VWFP04275 2813 aa9.88□□□□□ -0.83
MKS1-203ENST00000393120 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
MKS1-203ENST00000393120 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
MKS1-203ENST00000393120 TEN1Q86WV5 123 aa9.88□□□□□ -0.83
MKS1-203ENST00000393120 MRPL23Q16540 153 aaKnown RBP9.87□□□□□ -0.83
MKS1-203ENST00000393120 SHISA2Q6UWI4 295 aa9.87□□□□□ -0.83
MKS1-203ENST00000393120 A0A096LPF7 62 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 FOXI1Q12951 378 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 IBA57-AS1B1ANH7 110 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 SLC25A20O43772 301 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 LINC01620Q4KN68 170 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 TOMM7Q9P0U1 55 aa9.86□□□□□ -0.83
MKS1-203ENST00000393120 EGFEM1PQ0D2K5 195 aa9.85□□□□□ -0.83
MKS1-203ENST00000393120 KRTAP24-1Q3LI83 254 aa9.85□□□□□ -0.83
MKS1-203ENST00000393120 PPDPFLQ8WWR9 84 aa9.85□□□□□ -0.83
MKS1-203ENST00000393120 TEP1Q99973 2627 aaKnown RBP9.84□□□□□ -0.83
MKS1-203ENST00000393120 C9JAW5 83 aa9.84□□□□□ -0.83
MKS1-203ENST00000393120 XCL1P47992 114 aa9.84□□□□□ -0.83
MKS1-203ENST00000393120 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
MKS1-203ENST00000393120 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
MKS1-203ENST00000393120 Q8IZM0 81 aa9.84□□□□□ -0.83
MKS1-203ENST00000393120 LELP1Q5T871 98 aa9.83□□□□□ -0.84
MKS1-203ENST00000393120 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
MKS1-203ENST00000393120 ATRQ13535 2644 aa9.83□□□□□ -0.84
MKS1-203ENST00000393120 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 LINC00269Q8N2A0 174 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 ANKRD29Q8N6D5 301 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 LST1O00453 97 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 CARD19Q96LW7 228 aa9.82□□□□□ -0.84
MKS1-203ENST00000393120 LINC00158P58513 81 aa9.81□□□□□ -0.84
MKS1-203ENST00000393120 REG3AQ06141 175 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms