RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 COX11Q9Y6N1 276 aa14.75□□□□□ -0.05
SPHK1-202ENST00000392496 IGLV5-39A0A0G2JS06 123 aa14.74□□□□□ -0.05
SPHK1-202ENST00000392496 Q6ZTC4 211 aa14.74□□□□□ -0.05
SPHK1-202ENST00000392496 PTTG1IPP53801 180 aa14.73□□□□□ -0.05
SPHK1-202ENST00000392496 LELP1Q5T871 98 aa14.73□□□□□ -0.05
SPHK1-202ENST00000392496 ZFAND6Q6FIF0 208 aa14.73□□□□□ -0.05
SPHK1-202ENST00000392496 SRSF9Q13242 221 aaKnown RBP eCLIP14.73□□□□□ -0.05
SPHK1-202ENST00000392496 NDUFA12Q9UI09 145 aa14.73□□□□□ -0.05
SPHK1-202ENST00000392496 SMIM1B2RUZ4 78 aa14.72□□□□□ -0.05
SPHK1-202ENST00000392496 C10orf126Q8N4M7 172 aa14.72□□□□□ -0.05
SPHK1-202ENST00000392496 MRAPQ8TCY5 172 aa14.72□□□□□ -0.05
SPHK1-202ENST00000392496 K7EP13 123 aa14.71□□□□□ -0.05
SPHK1-202ENST00000392496 Q6ZVH6 145 aa14.71□□□□□ -0.05
SPHK1-202ENST00000392496 C11orf45Q8TAV5 145 aa14.71□□□□□ -0.05
SPHK1-202ENST00000392496 IGKV3OR2-268A0A0C4DH90 116 aa14.7□□□□□ -0.06
SPHK1-202ENST00000392496 A0A0J9YXY3 114 aa14.7□□□□□ -0.06
SPHK1-202ENST00000392496 LINC00959A0A1B0GUT2 108 aa14.7□□□□□ -0.06
SPHK1-202ENST00000392496 SMIM13P0DJ93 91 aa14.7□□□□□ -0.06
SPHK1-202ENST00000392496 CCL25O15444 150 aa14.68□□□□□ -0.06
SPHK1-202ENST00000392496 NANOS2P60321 138 aaKnown RBP14.68□□□□□ -0.06
SPHK1-202ENST00000392496 IGHV3OR16-9A0A0B4J2B5 98 aa14.67□□□□□ -0.06
SPHK1-202ENST00000392496 TMEM238C9JI98 176 aa14.67□□□□□ -0.06
SPHK1-202ENST00000392496 NDUFA1O15239 70 aa14.67□□□□□ -0.06
SPHK1-202ENST00000392496 LYPD5Q6UWN5 251 aa14.67□□□□□ -0.06
SPHK1-202ENST00000392496 NHP2Q9NX24 153 aaKnown RBP14.67□□□□□ -0.06
SPHK1-202ENST00000392496 IGHV3-30P01768 117 aa14.66□□□□□ -0.06
SPHK1-202ENST00000392496 IGHV3-30-5P0DP03 117 aa14.66□□□□□ -0.06
SPHK1-202ENST00000392496 SS18Q15532 418 aa14.66□□□□□ -0.06
SPHK1-202ENST00000392496 TMEM238LA0A1B0GVL6 79 aa14.65□□□□□ -0.06
SPHK1-202ENST00000392496 A6NJY4 79 aa14.65□□□□□ -0.06
SPHK1-202ENST00000392496 DEFB131BA0A096LNP1 70 aa14.65□□□□□ -0.06
SPHK1-202ENST00000392496 A0A1B0GWB2 263 aa14.64□□□□□ -0.07
SPHK1-202ENST00000392496 C9orf118A6NHY6 69 aa14.64□□□□□ -0.07
SPHK1-202ENST00000392496 A0A087WZ39 114 aa14.63□□□□□ -0.07
SPHK1-202ENST00000392496 LINC00269Q8N2A0 174 aa14.62□□□□□ -0.07
SPHK1-202ENST00000392496 LITAFQ99732 161 aa14.62□□□□□ -0.07
SPHK1-202ENST00000392496 TIMM17BO60830 172 aa14.62□□□□□ -0.07
SPHK1-202ENST00000392496 ANGP03950 147 aaKnown RBP14.62□□□□□ -0.07
SPHK1-202ENST00000392496 RAB37Q96AX2 223 aa14.62□□□□□ -0.07
SPHK1-202ENST00000392496 TENM3Q9P273 2699 aa14.62□□□□□ -0.07
SPHK1-202ENST00000392496 K7ERJ3 54 aa14.61□□□□□ -0.07
SPHK1-202ENST00000392496 Q9H8V8 135 aa14.61□□□□□ -0.07
SPHK1-202ENST00000392496 REG3AQ06141 175 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 CLPSL2Q6UWE3 100 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 Q8N3U1 123 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 SPANXDQ9BXN6 97 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 SPANXCQ9NY87 97 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 LINC01561Q8N1V8 128 aa14.6□□□□□ -0.07
SPHK1-202ENST00000392496 ZNF625Q96I27 306 aaPredicted RBP14.6□□□□□ -0.07
SPHK1-202ENST00000392496 TRAV10A0A0B4J240 114 aa14.59□□□□□ -0.07
SPHK1-202ENST00000392496 COX7B2Q8TF08 81 aa14.59□□□□□ -0.07
SPHK1-202ENST00000392496 XCL1P47992 114 aa14.58□□□□□ -0.08
SPHK1-202ENST00000392496 HERV-K104P63124 156 aa14.58□□□□□ -0.08
SPHK1-202ENST00000392496 C5orf38Q86SI9 138 aa14.58□□□□□ -0.08
SPHK1-202ENST00000392496 HUWE1Q7Z6Z7 4374 aaKnown RBP14.58□□□□□ -0.08
SPHK1-202ENST00000392496 H3BUT2 72 aa14.57□□□□□ -0.08
SPHK1-202ENST00000392496 VAMP3Q15836 100 aa14.57□□□□□ -0.08
SPHK1-202ENST00000392496 CIRBPQ14011 172 aaKnown RBP14.57□□□□□ -0.08
SPHK1-202ENST00000392496 MUSTN1Q8IVN3 82 aa14.57□□□□□ -0.08
SPHK1-202ENST00000392496 RPL24P83731 157 aaKnown RBP14.56□□□□□ -0.08
SPHK1-202ENST00000392496 MIAQ16674 131 aa14.56□□□□□ -0.08
SPHK1-202ENST00000392496 ADAMTSL4-AS1Q5T5F5 129 aa14.56□□□□□ -0.08
SPHK1-202ENST00000392496 CD164L2Q6UWJ8 174 aa14.56□□□□□ -0.08
SPHK1-202ENST00000392496 B9D2Q9BPU9 175 aa14.56□□□□□ -0.08
SPHK1-202ENST00000392496 CHCHD10Q8WYQ3 142 aaPredicted RBP14.55□□□□□ -0.08
SPHK1-202ENST00000392496 PRR34Q9NV39 138 aa14.55□□□□□ -0.08
SPHK1-202ENST00000392496 ESRGQ1W209 222 aa14.54□□□□□ -0.08
SPHK1-202ENST00000392496 IGLL5B9A064 214 aa14.53□□□□□ -0.08
SPHK1-202ENST00000392496 NHLRC4P0CG21 123 aaPredicted RBP14.53□□□□□ -0.08
SPHK1-202ENST00000392496 UBE2V1Q13404 147 aa14.53□□□□□ -0.08
SPHK1-202ENST00000392496 TOMM7Q9P0U1 55 aa14.53□□□□□ -0.08
SPHK1-202ENST00000392496 A4D1N5 150 aa14.52□□□□□ -0.08
SPHK1-202ENST00000392496 IFITM1P13164 125 aa14.52□□□□□ -0.08
SPHK1-202ENST00000392496 C15orf53Q8NAA6 179 aa14.52□□□□□ -0.08
SPHK1-202ENST00000392496 NAA38Q9BRA0 125 aaKnown RBP14.52□□□□□ -0.08
SPHK1-202ENST00000392496 KLK12Q9UKR0 248 aa14.52□□□□□ -0.08
SPHK1-202ENST00000392496 A0A1W2PPM0 123 aa14.52□□□□□ -0.09
SPHK1-202ENST00000392496 PRSS2P07478 247 aa14.52□□□□□ -0.09
SPHK1-202ENST00000392496 WFDC10BQ8IUB3 73 aa14.52□□□□□ -0.09
SPHK1-202ENST00000392496 APOMO95445 188 aa14.51□□□□□ -0.09
SPHK1-202ENST00000392496 CFC1BP0CG36 223 aa14.51□□□□□ -0.09
SPHK1-202ENST00000392496 CFC1P0CG37 223 aa14.51□□□□□ -0.09
SPHK1-202ENST00000392496 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.5□□□□□ -0.09
SPHK1-202ENST00000392496 COX7A2LO14548 114 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 MEIG1Q5JSS6 88 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 SFTA2Q6UW10 78 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 MEGF8Q7Z7M0 2845 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 IGLV10-54A0A075B6I4 117 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 IGHV3-33P01772 117 aa14.5□□□□□ -0.09
SPHK1-202ENST00000392496 ENHOQ6UWT2 76 aa14.49□□□□□ -0.09
SPHK1-202ENST00000392496 Q8IZM0 81 aa14.49□□□□□ -0.09
SPHK1-202ENST00000392496 FABP2P12104 132 aa14.48□□□□□ -0.09
SPHK1-202ENST00000392496 A0A0B4J2C4 111 aa14.47□□□□□ -0.09
SPHK1-202ENST00000392496 FOXI1Q12951 378 aa14.47□□□□□ -0.09
SPHK1-202ENST00000392496 FBN3Q75N90 2809 aa14.47□□□□□ -0.09
SPHK1-202ENST00000392496 CRPP02741 224 aa14.47□□□□□ -0.09
SPHK1-202ENST00000392496 PGPEP1Q9NXJ5 209 aa14.47□□□□□ -0.09
SPHK1-202ENST00000392496 TRAV8-4A0A0B4J246 113 aa14.46□□□□□ -0.09
SPHK1-202ENST00000392496 C6orf226Q5I0X4 101 aa14.46□□□□□ -0.09
SPHK1-202ENST00000392496 COPS9Q8WXC6 57 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms