RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PPP1R1CQ8WVI7 109 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 TMEM14BQ9NUH8 114 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 PSENENQ9NZ42 101 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 V9GYV3 84 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 RRBP1Q9P2E9 1410 aaKnown RBP0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 ALKQ9UM73 1620 aa0.77□□□□□ -2.29
SNORA40.19-201ENST00000390846 TARBP1Q13395 1621 aaKnown RBP0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 TRBV25-1A0A075B6N4 114 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 A0A087WVE0 104 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 PIGBOS1A0A0B4J2F0 54 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 F8WEM9 126 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 LYNX1P0DP58 116 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 KRTDAPP60985 99 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 Q5BKY6 102 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 NMSQ5H8A3 153 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 ZNF720Q7Z2F6 126 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 PLAC4Q8WY50 150 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 SNURFQ9Y675 71 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 LINC01558Q9Y6Z2 57 aa0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 RP1L1Q8IWN7 2480 aaPredicted RBP0.76□□□□□ -2.29
SNORA40.19-201ENST00000390846 SCN11AQ9UI33 1791 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 C5P01031 1676 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 MADDQ8WXG6 1647 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 CFAP74Q9C0B2 1584 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 CEP170BQ9Y4F5 1589 aaPredicted RBP0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 PLIN4Q96Q06 1357 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 ASXL3Q9C0F0 2248 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 GVQW2A0A096LPI5 108 aaPredicted RBP0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 TRBV30A0A0K0K1B3 111 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 F8VRH5 84 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 NCR3O14931 201 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 KRTAP10-4P60372 401 aaPredicted RBP0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 CFAP126Q5VTH2 177 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 PRR15LQ9BU68 103 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 PLAC8Q9NZF1 115 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 SPCS1Q9Y6A9 102 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 RGPD8O14715 1765 aaPredicted RBP0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 RGPD5Q99666 1765 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 PKD1L3Q7Z443 1732 aa0.75□□□□□ -2.29
SNORA40.19-201ENST00000390846 UQCRHLA0A096LP55 91 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 CTXND1A0A1B0GTU2 59 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 NDUFC1O43677 76 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 COX6CP09669 75 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 ACYP2P14621 99 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 SPINK7P58062 85 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 PMCHL1Q16048 86 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 FAM74A4Q5TZK3 123 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 UQCR10Q9UDW1 63 aa0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 ANKRD17O75179 2603 aaKnown RBP0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 ASH1LQ9NR48 2969 aaKnown RBP0.74□□□□□ -2.29
SNORA40.19-201ENST00000390846 PARP4Q9UKK3 1724 aaKnown RBP0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 K7EIL1 84 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 UQCRHP07919 91 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 SPINT3P49223 89 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 BVES-AS1Q5T3Y7 98 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 C10orf99Q6UWK7 81 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 BAGE2Q86Y30 109 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 KMT2BQ9UMN6 2715 aaPredicted RBP0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 RAPGEF6Q8TEU7 1601 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 JMJD1CQ15652 2540 aa0.73□□□□□ -2.29
SNORA40.19-201ENST00000390846 XRN1Q8IZH2 1706 aaKnown RBP0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 LRP6O75581 1613 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 C7orf77A4D0Y5 90 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 IQCF6A8MYZ5 107 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 IGLC2P0DOY2 106 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 IGLC3P0DOY3 106 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 PSMG4Q5JS54 123 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 C6orf52Q5T4I8 152 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 TMEM170BQ5T4T1 132 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 BAGE3Q86Y29 109 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 LINC01600Q96MT4 127 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 C10orf95Q9H7T3 257 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 ST20Q9HBF5 79 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 R4GMQ9 66 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 SLIT1O75093 1534 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 UGGT2Q9NYU1 1516 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 C1orf167Q5SNV9 1468 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 LRRC37A2A6NM11 1700 aa0.72□□□□□ -2.29
SNORA40.19-201ENST00000390846 PTPN23Q9H3S7 1636 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 F2Z2F3 143 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 H3BUT2 72 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 UQCR11O14957 56 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 ARMS2P0C7Q2 107 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 SAA2P0DJI9 122 aaPredicted RBP0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 LINC00575Q6W349 94 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 Q6ZRX8 168 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 DEFB107AQ8IZN7 70 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 S100A13Q99584 98 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 POLR1AO95602 1720 aaPredicted RBP0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 HELZ2Q9BYK8 2649 aaKnown RBP0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 USP32Q8NFA0 1604 aa0.71□□□□□ -2.3
SNORA40.19-201ENST00000390846 CUX1P39880 1505 aa0.7□□□□□ -2.3
SNORA40.19-201ENST00000390846 TIAM2Q8IVF5 1701 aa0.7□□□□□ -2.3
SNORA40.19-201ENST00000390846 WIZO95785 1651 aa0.7□□□□□ -2.3
SNORA40.19-201ENST00000390846 CCDC141Q6ZP82 1450 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms