RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
NKX3-1-201ENST00000380871 SMIM1B2RUZ4 78 aa11.59□□□□□ -0.55
NKX3-1-201ENST00000380871 PIK3CD-AS1Q5SR53 167 aa11.59□□□□□ -0.55
NKX3-1-201ENST00000380871 SS18L2Q9UHA2 77 aa11.59□□□□□ -0.55
NKX3-1-201ENST00000380871 GAGE7O76087 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 H3BT86 120 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 TIMM17BO60830 172 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE4Q13068 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE5Q13069 117 aa11.58□□□□□ -0.56
NKX3-1-201ENST00000380871 B5MCH6 92 aa11.57□□□□□ -0.56
NKX3-1-201ENST00000380871 IFITM1P13164 125 aa11.57□□□□□ -0.56
NKX3-1-201ENST00000380871 PRIMA1Q86XR5 153 aa11.56□□□□□ -0.56
NKX3-1-201ENST00000380871 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
NKX3-1-201ENST00000380871 HERVK_113P63121 156 aa11.56□□□□□ -0.56
NKX3-1-201ENST00000380871 CIRBPQ14011 172 aaKnown RBP11.56□□□□□ -0.56
NKX3-1-201ENST00000380871 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
NKX3-1-201ENST00000380871 MEIG1Q5JSS6 88 aa11.55□□□□□ -0.56
NKX3-1-201ENST00000380871 RNASE1P07998 156 aaKnown RBP11.55□□□□□ -0.56
NKX3-1-201ENST00000380871 PF4P02776 101 aa11.55□□□□□ -0.56
NKX3-1-201ENST00000380871 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
NKX3-1-201ENST00000380871 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
NKX3-1-201ENST00000380871 K7EQD1 137 aa11.54□□□□□ -0.56
NKX3-1-201ENST00000380871 F5H768 121 aa11.53□□□□□ -0.56
NKX3-1-201ENST00000380871 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
NKX3-1-201ENST00000380871 TRAV25A0A0B4J276 109 aa11.52□□□□□ -0.56
NKX3-1-201ENST00000380871 LY6G6DO95868 133 aa11.52□□□□□ -0.56
NKX3-1-201ENST00000380871 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.56
NKX3-1-201ENST00000380871 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.56
NKX3-1-201ENST00000380871 GAGE6Q13070 117 aa11.52□□□□□ -0.57
NKX3-1-201ENST00000380871 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
NKX3-1-201ENST00000380871 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.57
NKX3-1-201ENST00000380871 COX7A2LO14548 114 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 DEFB130BP0DP73 79 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 DEFB130AP0DP74 79 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 HILS1P60008 231 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 ATRQ13535 2644 aa11.5□□□□□ -0.57
NKX3-1-201ENST00000380871 KRTAP10-3P60369 221 aa11.49□□□□□ -0.57
NKX3-1-201ENST00000380871 SHISA2Q6UWI4 295 aa11.49□□□□□ -0.57
NKX3-1-201ENST00000380871 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
NKX3-1-201ENST00000380871 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
NKX3-1-201ENST00000380871 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
NKX3-1-201ENST00000380871 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
NKX3-1-201ENST00000380871 IGLV1-51P01701 117 aa11.48□□□□□ -0.57
NKX3-1-201ENST00000380871 DAZ2Q13117 558 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 DAZ3Q9NR90 486 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 TOMM7Q9P0U1 55 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 Q6Q795 121 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 CHCHD5Q9BSY4 110 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 Q9HAA7 133 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
NKX3-1-201ENST00000380871 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
NKX3-1-201ENST00000380871 C22orf24Q9Y442 160 aa11.46□□□□□ -0.57
NKX3-1-201ENST00000380871 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
NKX3-1-201ENST00000380871 UBE2L6O14933 153 aa11.46□□□□□ -0.58
NKX3-1-201ENST00000380871 DEFB4AO15263 64 aa11.46□□□□□ -0.58
NKX3-1-201ENST00000380871 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.58
NKX3-1-201ENST00000380871 C16orf95Q9H693 158 aa11.46□□□□□ -0.58
NKX3-1-201ENST00000380871 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.58
NKX3-1-201ENST00000380871 TRBV10-1A0A0K0K1A3 114 aa11.45□□□□□ -0.58
NKX3-1-201ENST00000380871 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
NKX3-1-201ENST00000380871 VWFP04275 2813 aa11.45□□□□□ -0.58
NKX3-1-201ENST00000380871 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
NKX3-1-201ENST00000380871 TMEM243Q9BU79 118 aa11.45□□□□□ -0.58
NKX3-1-201ENST00000380871 KMT2BQ9UMN6 2715 aaPredicted RBP11.44□□□□□ -0.58
NKX3-1-201ENST00000380871 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
NKX3-1-201ENST00000380871 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
NKX3-1-201ENST00000380871 A0A096LPF7 62 aa11.44□□□□□ -0.58
NKX3-1-201ENST00000380871 LINC00337Q8N6G1 96 aa11.44□□□□□ -0.58
NKX3-1-201ENST00000380871 IGLV4-60A0A075B6I1 120 aa11.43□□□□□ -0.58
NKX3-1-201ENST00000380871 BAALC-AS2P0C853 105 aa11.43□□□□□ -0.58
NKX3-1-201ENST00000380871 C19orf73Q9NVV2 129 aa11.43□□□□□ -0.58
NKX3-1-201ENST00000380871 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
NKX3-1-201ENST00000380871 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
NKX3-1-201ENST00000380871 HERV-K104P63124 156 aa11.4□□□□□ -0.58
NKX3-1-201ENST00000380871 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
NKX3-1-201ENST00000380871 C11orf68Q9H3H3 251 aaKnown RBP11.4□□□□□ -0.58
NKX3-1-201ENST00000380871 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.59
NKX3-1-201ENST00000380871 C16orf74Q96GX8 76 aa11.4□□□□□ -0.59
NKX3-1-201ENST00000380871 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 SND1-IT1Q9HBX3 110 aa11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 TENM1Q9UKZ4 2725 aa11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 TRBV7-7A0A0K0K1E9 115 aa11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
NKX3-1-201ENST00000380871 A0A087WYN8 130 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 TRACP01848 142 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 CRPP02741 224 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 PFN2P35080 140 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 LINC00158P58513 81 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 C5orf38Q86SI9 138 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 COPS9Q8WXC6 57 aa11.38□□□□□ -0.59
NKX3-1-201ENST00000380871 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms