RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 PRB2P02812 416 aaPredicted RBP7.99□□□□□ -1.13
USP6NL-202ENST00000379237 CCKP06307 115 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 UBE2DNLQ8IWF7 75 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 ZFYVE26Q68DK2 2539 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 A0A1W2PRX2 142 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 HIVEP2P31629 2446 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 DEFB131AP59861 70 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 DSPP15924 2871 aaKnown RBP7.98□□□□□ -1.13
USP6NL-202ENST00000379237 KLLNB2CW77 178 aa7.98□□□□□ -1.13
USP6NL-202ENST00000379237 COX6A2Q02221 97 aa7.97□□□□□ -1.13
USP6NL-202ENST00000379237 F8P00451 2351 aa7.97□□□□□ -1.13
USP6NL-202ENST00000379237 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
USP6NL-202ENST00000379237 RETNQ9HD89 108 aa7.97□□□□□ -1.13
USP6NL-202ENST00000379237 MUC4Q99102 2169 aa7.96□□□□□ -1.13
USP6NL-202ENST00000379237 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.13
USP6NL-202ENST00000379237 NDUFC1O43677 76 aa7.96□□□□□ -1.14
USP6NL-202ENST00000379237 PLA2G2CQ5R387 149 aa7.96□□□□□ -1.14
USP6NL-202ENST00000379237 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
USP6NL-202ENST00000379237 ODF3BA8MYP8 253 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 UBE2E2Q96LR5 201 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 H3BUX3 64 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 MIFP14174 115 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 FUSP35637 526 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP6NL-202ENST00000379237 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 K7ENP7 123 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
USP6NL-202ENST00000379237 ANKRD11Q6UB99 2663 aaPredicted RBP7.94□□□□□ -1.14
USP6NL-202ENST00000379237 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
USP6NL-202ENST00000379237 SS18Q15532 418 aa7.94□□□□□ -1.14
USP6NL-202ENST00000379237 LRCOL1A6NCL2 159 aa7.94□□□□□ -1.14
USP6NL-202ENST00000379237 PRM2P04554 102 aa7.94□□□□□ -1.14
USP6NL-202ENST00000379237 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
USP6NL-202ENST00000379237 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
USP6NL-202ENST00000379237 USP9XQ93008 2570 aaPredicted RBP7.93□□□□□ -1.14
USP6NL-202ENST00000379237 SMG1Q96Q15 3661 aaKnown RBP7.93□□□□□ -1.14
USP6NL-202ENST00000379237 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
USP6NL-202ENST00000379237 C5orf56Q8N8D9 126 aa7.93□□□□□ -1.14
USP6NL-202ENST00000379237 USP9YO00507 2555 aaPredicted RBP7.93□□□□□ -1.14
USP6NL-202ENST00000379237 BPESC1Q9GZL8 116 aa7.93□□□□□ -1.14
USP6NL-202ENST00000379237 Q8N6K4 173 aa7.92□□□□□ -1.14
USP6NL-202ENST00000379237 TRGV4A0A0C4DH28 118 aa7.92□□□□□ -1.14
USP6NL-202ENST00000379237 CCL18P55774 89 aa7.92□□□□□ -1.14
USP6NL-202ENST00000379237 CHCHD7Q9BUK0 85 aa7.92□□□□□ -1.14
USP6NL-202ENST00000379237 CFHR3Q02985 330 aa7.92□□□□□ -1.14
USP6NL-202ENST00000379237 PMAIP1Q13794 54 aa7.91□□□□□ -1.14
USP6NL-202ENST00000379237 C9orf129Q5T035 196 aaKnown RBP7.91□□□□□ -1.14
USP6NL-202ENST00000379237 PSCAO43653 123 aa7.91□□□□□ -1.14
USP6NL-202ENST00000379237 ZFP36P26651 326 aaKnown RBP7.91□□□□□ -1.14
USP6NL-202ENST00000379237 DMXL1Q9Y485 3027 aa7.91□□□□□ -1.14
USP6NL-202ENST00000379237 INSP01308 110 aa7.9□□□□□ -1.14
USP6NL-202ENST00000379237 IGFL2Q6UWQ7 119 aa7.9□□□□□ -1.14
USP6NL-202ENST00000379237 MAPK1IP1LQ8NDC0 245 aa7.9□□□□□ -1.14
USP6NL-202ENST00000379237 Q8N3U1 123 aa7.9□□□□□ -1.14
USP6NL-202ENST00000379237 H7BZZ5 65 aa7.89□□□□□ -1.15
USP6NL-202ENST00000379237 Q6ZTI0 123 aa7.89□□□□□ -1.15
USP6NL-202ENST00000379237 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
USP6NL-202ENST00000379237 CLPSL2Q6UWE3 100 aa7.89□□□□□ -1.15
USP6NL-202ENST00000379237 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 B4DSR2 109 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 Q9UF83 564 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 ZNF462Q96JM2 2506 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 IGFL3Q6UXB1 125 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 NREPQ16612 68 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 STHQ8IWL8 128 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 SIRPDQ9H106 197 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 ABCA12Q86UK0 2595 aa7.88□□□□□ -1.15
USP6NL-202ENST00000379237 FASNP49327 2511 aaKnown RBP7.87□□□□□ -1.15
USP6NL-202ENST00000379237 A0A087WZ39 114 aa7.87□□□□□ -1.15
USP6NL-202ENST00000379237 SPTSSBQ8NFR3 76 aa7.87□□□□□ -1.15
USP6NL-202ENST00000379237 GRNP28799 593 aaKnown RBP7.86□□□□□ -1.15
USP6NL-202ENST00000379237 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 TRAV10A0A0B4J240 114 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 IBA57-AS1B1ANH7 110 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 Q6ZSN1 163 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.86□□□□□ -1.15
USP6NL-202ENST00000379237 LINC01547P58512 204 aaPredicted RBP7.86□□□□□ -1.15
USP6NL-202ENST00000379237 TMEM254Q8TBM7 123 aa7.86□□□□□ -1.15
USP6NL-202ENST00000379237 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 BEAN1Q3B7T3 259 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 APRG1Q8IVJ8 170 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 PSPHP1O15172 72 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 ESRGQ1W209 222 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 K7EQD1 137 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 Q8N814 137 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 BOD1L1Q8NFC6 3051 aa7.85□□□□□ -1.15
USP6NL-202ENST00000379237 K7EMT4 169 aa7.84□□□□□ -1.15
USP6NL-202ENST00000379237 BPY2O14599 106 aa7.84□□□□□ -1.15
USP6NL-202ENST00000379237 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
USP6NL-202ENST00000379237 CDSNQ15517 529 aa7.84□□□□□ -1.15
USP6NL-202ENST00000379237 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
USP6NL-202ENST00000379237 H3BUA1 57 aa7.83□□□□□ -1.16
USP6NL-202ENST00000379237 Q6ZVQ6 151 aa7.83□□□□□ -1.16
USP6NL-202ENST00000379237 DSCR9P59020 149 aa7.83□□□□□ -1.16
USP6NL-202ENST00000379237 PRR4Q16378 134 aa7.83□□□□□ -1.16
USP6NL-202ENST00000379237 K7EQG2 157 aa7.83□□□□□ -1.16
USP6NL-202ENST00000379237 CMC4P56277 68 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-202ENST00000379237 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 PDE6GP18545 87 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 TM2D3Q9BRN9 247 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms