RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 F5H768 121 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 LITAFQ99732 161 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 SPANXDQ9BXN6 97 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 SPANXCQ9NY87 97 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 TRAV26-1A0A087WT03 109 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 TIMM17BO60830 172 aa12.18□□□□□ -0.46
NKX2-2-201ENST00000377142 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
NKX2-2-201ENST00000377142 CYSRT1A8MQ03 144 aa12.17□□□□□ -0.46
NKX2-2-201ENST00000377142 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
NKX2-2-201ENST00000377142 APOMO95445 188 aa12.17□□□□□ -0.46
NKX2-2-201ENST00000377142 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
NKX2-2-201ENST00000377142 A0A096LPF7 62 aa12.16□□□□□ -0.46
NKX2-2-201ENST00000377142 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
NKX2-2-201ENST00000377142 CFC1P0CG37 223 aa12.15□□□□□ -0.46
NKX2-2-201ENST00000377142 MUSTN1Q8IVN3 82 aa12.15□□□□□ -0.46
NKX2-2-201ENST00000377142 A4D1N5 150 aa12.15□□□□□ -0.46
NKX2-2-201ENST00000377142 MIAQ16674 131 aa12.15□□□□□ -0.46
NKX2-2-201ENST00000377142 TMEM262E9PQX1 116 aa12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 RBX1P62877 108 aa12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 FBN1P35555 2871 aaKnown RBP12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 Q9H8V8 135 aa12.14□□□□□ -0.47
NKX2-2-201ENST00000377142 BAHCC1Q9P281 2608 aa12.13□□□□□ -0.47
NKX2-2-201ENST00000377142 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
NKX2-2-201ENST00000377142 TSPAN13O95857 204 aa12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 HTN3P15516 51 aa12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
NKX2-2-201ENST00000377142 IGHV3OR16-9A0A0B4J2B5 98 aa12.11□□□□□ -0.47
NKX2-2-201ENST00000377142 LINC00959A0A1B0GUT2 108 aa12.11□□□□□ -0.47
NKX2-2-201ENST00000377142 HERV-K104P63124 156 aa12.11□□□□□ -0.47
NKX2-2-201ENST00000377142 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
NKX2-2-201ENST00000377142 RETNQ9HD89 108 aa12.11□□□□□ -0.47
NKX2-2-201ENST00000377142 G3V4G9 280 aa12.1□□□□□ -0.47
NKX2-2-201ENST00000377142 PRSS2P07478 247 aa12.1□□□□□ -0.47
NKX2-2-201ENST00000377142 IFITM1P13164 125 aa12.1□□□□□ -0.47
NKX2-2-201ENST00000377142 C11orf68Q9H3H3 251 aaKnown RBP12.1□□□□□ -0.47
NKX2-2-201ENST00000377142 SS18Q15532 418 aa12.09□□□□□ -0.47
NKX2-2-201ENST00000377142 LYRM7Q5U5X0 104 aa12.09□□□□□ -0.47
NKX2-2-201ENST00000377142 A0A087WZ39 114 aa12.09□□□□□ -0.47
NKX2-2-201ENST00000377142 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
NKX2-2-201ENST00000377142 STAB1Q9NY15 2570 aa12.07□□□□□ -0.48
NKX2-2-201ENST00000377142 LELP1Q5T871 98 aa12.07□□□□□ -0.48
NKX2-2-201ENST00000377142 EIF4EBP3O60516 100 aaPredicted RBP12.06□□□□□ -0.48
NKX2-2-201ENST00000377142 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
NKX2-2-201ENST00000377142 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
NKX2-2-201ENST00000377142 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
NKX2-2-201ENST00000377142 CMYA5Q8N3K9 4069 aa12.05□□□□□ -0.48
NKX2-2-201ENST00000377142 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 H3BNG1 76 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 ERG28Q9UKR5 140 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 NPC2P61916 151 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 C5orf38Q86SI9 138 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 LINC01561Q8N1V8 128 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 DAND5Q8N907 189 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
NKX2-2-201ENST00000377142 XCL1P47992 114 aa12.03□□□□□ -0.48
NKX2-2-201ENST00000377142 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
NKX2-2-201ENST00000377142 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
NKX2-2-201ENST00000377142 H3BMG7 143 aa12.02□□□□□ -0.48
NKX2-2-201ENST00000377142 ANGP03950 147 aaKnown RBP12.02□□□□□ -0.48
NKX2-2-201ENST00000377142 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.48
NKX2-2-201ENST00000377142 MAST4O15021 2626 aa12.02□□□□□ -0.48
NKX2-2-201ENST00000377142 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
NKX2-2-201ENST00000377142 F8W1H4 67 aa12.01□□□□□ -0.49
NKX2-2-201ENST00000377142 REG3AQ06141 175 aa12.01□□□□□ -0.49
NKX2-2-201ENST00000377142 TRBV20-1A0A075B6N2 111 aa12□□□□□ -0.49
NKX2-2-201ENST00000377142 Q6ZTC4 211 aa12□□□□□ -0.49
NKX2-2-201ENST00000377142 DNAH3Q8TD57 4116 aa12□□□□□ -0.49
NKX2-2-201ENST00000377142 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 Q1RN00 199 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 CD164L2Q6UWJ8 174 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 Q8N3U1 123 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 PSMB2P49721 201 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 LYPD5Q6UWN5 251 aa11.99□□□□□ -0.49
NKX2-2-201ENST00000377142 H7C2G1 150 aa11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 OCIAD2Q56VL3 154 aa11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 PKD1L1Q8TDX9 2849 aa11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 Q8IZM0 81 aa11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
NKX2-2-201ENST00000377142 COX7A2LO14548 114 aa11.96□□□□□ -0.49
NKX2-2-201ENST00000377142 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
NKX2-2-201ENST00000377142 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.5
NKX2-2-201ENST00000377142 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.5
NKX2-2-201ENST00000377142 TCL1BO95988 128 aa11.96□□□□□ -0.5
NKX2-2-201ENST00000377142 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.5
NKX2-2-201ENST00000377142 PRO0461Q9UI25 63 aa11.96□□□□□ -0.5
NKX2-2-201ENST00000377142 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
NKX2-2-201ENST00000377142 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms