RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 NDUFA1O15239 70 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 SH2D6Q7Z4S9 175 aa14.24□□□□□ -0.13
VSX1-202ENST00000376709 IGLV5-39A0A0G2JS06 123 aa14.23□□□□□ -0.13
VSX1-202ENST00000376709 GAGE6Q13070 117 aa14.23□□□□□ -0.13
VSX1-202ENST00000376709 MIAQ16674 131 aa14.23□□□□□ -0.13
VSX1-202ENST00000376709 ETDBQ3ZM63 59 aa14.23□□□□□ -0.13
VSX1-202ENST00000376709 LINC00612Q8N6U2 182 aa14.23□□□□□ -0.13
VSX1-202ENST00000376709 SMIM1B2RUZ4 78 aa14.22□□□□□ -0.13
VSX1-202ENST00000376709 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
VSX1-202ENST00000376709 DEFB135Q30KP9 77 aa14.22□□□□□ -0.13
VSX1-202ENST00000376709 H7C2G1 150 aa14.21□□□□□ -0.13
VSX1-202ENST00000376709 NPC2P61916 151 aa14.21□□□□□ -0.13
VSX1-202ENST00000376709 ERG28Q9UKR5 140 aa14.21□□□□□ -0.13
VSX1-202ENST00000376709 IGHV3-33P01772 117 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 SCGB1C2P0DMR2 95 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 APOC4P55056 127 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 Q9H8V8 135 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 TIMM17BO60830 172 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 TCL1BO95988 128 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 GYPEP15421 78 aa14.2□□□□□ -0.14
VSX1-202ENST00000376709 CIRBPQ14011 172 aaKnown RBP14.2□□□□□ -0.14
VSX1-202ENST00000376709 FAM222AQ5U5X8 452 aa14.19□□□□□ -0.14
VSX1-202ENST00000376709 Q1RN00 199 aa14.19□□□□□ -0.14
VSX1-202ENST00000376709 IGKV3OR2-268A0A0C4DH90 116 aa14.18□□□□□ -0.14
VSX1-202ENST00000376709 F5H768 121 aa14.18□□□□□ -0.14
VSX1-202ENST00000376709 SMCPP49901 116 aaPredicted RBP14.18□□□□□ -0.14
VSX1-202ENST00000376709 TRBV20-1A0A075B6N2 111 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 DAND5Q8N907 189 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 ATP6V0E2Q8NHE4 81 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 IGLV4-60A0A075B6I1 120 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 LYRM9A8MSI8 78 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
VSX1-202ENST00000376709 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
VSX1-202ENST00000376709 DEFB4AO15263 64 aa14.16□□□□□ -0.14
VSX1-202ENST00000376709 IFITM1P13164 125 aa14.15□□□□□ -0.14
VSX1-202ENST00000376709 PRIMA1Q86XR5 153 aa14.15□□□□□ -0.14
VSX1-202ENST00000376709 WFDC9Q8NEX5 89 aa14.14□□□□□ -0.15
VSX1-202ENST00000376709 FBN1P35555 2871 aaKnown RBP14.13□□□□□ -0.15
VSX1-202ENST00000376709 IGHV4-28A0A0C4DH34 117 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 A0A0U1RRA0 63 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 MEIG1Q5JSS6 88 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 PAX4O43316 350 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 KRTAP24-1Q3LI83 254 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 RNF183Q96D59 192 aa14.12□□□□□ -0.15
VSX1-202ENST00000376709 A0A096LPF7 62 aa14.11□□□□□ -0.15
VSX1-202ENST00000376709 TMEM262E9PQX1 116 aa14.11□□□□□ -0.15
VSX1-202ENST00000376709 J3QR89 54 aa14.1□□□□□ -0.15
VSX1-202ENST00000376709 HERV-K104P63124 156 aa14.1□□□□□ -0.15
VSX1-202ENST00000376709 DAD1P61803 113 aa14.09□□□□□ -0.15
VSX1-202ENST00000376709 LINC00308Q8TCZ7 52 aa14.09□□□□□ -0.15
VSX1-202ENST00000376709 IGHV4-30-4P0DP06 118 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 MIFP14174 115 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 COX7B2Q8TF08 81 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 COPS9Q8WXC6 57 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 TOMM7Q9P0U1 55 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 IGHV3OR16-9A0A0B4J2B5 98 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 TRBV30A0A0K0K1B3 111 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 WIPF1O43516 503 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 TRIAP1O43715 76 aa14.07□□□□□ -0.16
VSX1-202ENST00000376709 Q8NAQ8 132 aa14.06□□□□□ -0.16
VSX1-202ENST00000376709 ICOSQ9Y6W8 199 aa14.06□□□□□ -0.16
VSX1-202ENST00000376709 LINC00959A0A1B0GUT2 108 aa14.05□□□□□ -0.16
VSX1-202ENST00000376709 FOXI1Q12951 378 aa14.05□□□□□ -0.16
VSX1-202ENST00000376709 CELA1Q9UNI1 258 aa14.05□□□□□ -0.16
VSX1-202ENST00000376709 BAHCC1Q9P281 2608 aa14.05□□□□□ -0.16
VSX1-202ENST00000376709 A0A1B0GUV1 79 aa14.05□□□□□ -0.16
VSX1-202ENST00000376709 RPL13AP40429 203 aaKnown RBP14.05□□□□□ -0.16
VSX1-202ENST00000376709 CMYA5Q8N3K9 4069 aa14.04□□□□□ -0.16
VSX1-202ENST00000376709 CYSRT1A8MQ03 144 aa14.04□□□□□ -0.16
VSX1-202ENST00000376709 ATP5G1P05496 136 aa14.04□□□□□ -0.16
VSX1-202ENST00000376709 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
VSX1-202ENST00000376709 A0A087WZ39 114 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 C9JAW5 83 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 ATXN8Q156A1 80 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 PKD1L1Q8TDX9 2849 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 COX6CP09669 75 aa14.03□□□□□ -0.16
VSX1-202ENST00000376709 SPART-AS1P0CW21 52 aa14.02□□□□□ -0.16
VSX1-202ENST00000376709 OXLD1Q5BKU9 147 aa14.02□□□□□ -0.16
VSX1-202ENST00000376709 TEN1Q86WV5 123 aa14.02□□□□□ -0.16
VSX1-202ENST00000376709 TRAV26-1A0A087WT03 109 aa14.02□□□□□ -0.17
VSX1-202ENST00000376709 GAGE12HA6NDE8 117 aa14.02□□□□□ -0.17
VSX1-202ENST00000376709 SOSTDC1Q6X4U4 206 aa14.02□□□□□ -0.17
VSX1-202ENST00000376709 SLC25A20O43772 301 aa14.01□□□□□ -0.17
VSX1-202ENST00000376709 XCL1P47992 114 aa14.01□□□□□ -0.17
VSX1-202ENST00000376709 SS18Q15532 418 aa14.01□□□□□ -0.17
VSX1-202ENST00000376709 CLPSL2Q6UWE3 100 aa14.01□□□□□ -0.17
VSX1-202ENST00000376709 ANKRD29Q8N6D5 301 aa14□□□□□ -0.17
VSX1-202ENST00000376709 HTN3P15516 51 aa14□□□□□ -0.17
VSX1-202ENST00000376709 C3orf56Q8N813 242 aa13.99□□□□□ -0.17
VSX1-202ENST00000376709 CARD19Q96LW7 228 aa13.99□□□□□ -0.17
VSX1-202ENST00000376709 SPATA25Q9BR10 227 aa13.98□□□□□ -0.17
VSX1-202ENST00000376709 MAST4O15021 2626 aa13.98□□□□□ -0.17
VSX1-202ENST00000376709 LINC01620Q4KN68 170 aa13.98□□□□□ -0.17
VSX1-202ENST00000376709 PPDPFLQ8WWR9 84 aa13.98□□□□□ -0.17
VSX1-202ENST00000376709 KRTAP10-11P60412 298 aa13.97□□□□□ -0.17
VSX1-202ENST00000376709 MIR7-3HGQ8N6C7 128 aa13.96□□□□□ -0.18
VSX1-202ENST00000376709 LINC00158P58513 81 aa13.95□□□□□ -0.18
VSX1-202ENST00000376709 LINC00269Q8N2A0 174 aa13.95□□□□□ -0.18
VSX1-202ENST00000376709 CLEC2BQ92478 149 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms