RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
MSH5-202ENST00000375740 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
MSH5-202ENST00000375740 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
MSH5-202ENST00000375740 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
MSH5-202ENST00000375740 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
MSH5-202ENST00000375740 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
MSH5-202ENST00000375740 KLK5Q9Y337 293 aaPredicted RBP9.97□□□□□ -0.81
MSH5-202ENST00000375740 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
MSH5-202ENST00000375740 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
MSH5-202ENST00000375740 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
MSH5-202ENST00000375740 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.81
MSH5-202ENST00000375740 DAZ2Q13117 558 aaKnown RBP9.96□□□□□ -0.81
MSH5-202ENST00000375740 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.81
MSH5-202ENST00000375740 H3BT86 120 aa9.96□□□□□ -0.82
MSH5-202ENST00000375740 DAND5Q8N907 189 aa9.96□□□□□ -0.82
MSH5-202ENST00000375740 PF4P02776 101 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 K7EQD1 137 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 LST1O00453 97 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
MSH5-202ENST00000375740 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
MSH5-202ENST00000375740 RPL36AP83881 106 aaKnown RBP9.94□□□□□ -0.82
MSH5-202ENST00000375740 DEFB121Q5J5C9 76 aa9.94□□□□□ -0.82
MSH5-202ENST00000375740 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
MSH5-202ENST00000375740 RPL36ALQ969Q0 106 aaKnown RBP9.94□□□□□ -0.82
MSH5-202ENST00000375740 HECTD1Q9ULT8 2610 aa9.94□□□□□ -0.82
MSH5-202ENST00000375740 JMJD1CQ15652 2540 aa9.94□□□□□ -0.82
MSH5-202ENST00000375740 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
MSH5-202ENST00000375740 FAM240AA0A1B0GVK7 77 aa9.93□□□□□ -0.82
MSH5-202ENST00000375740 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
MSH5-202ENST00000375740 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
MSH5-202ENST00000375740 NOTCH3Q9UM47 2321 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 TRGV2A0A075B6R0 118 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 COX6CP09669 75 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 C9orf153Q5TBE3 101 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 NDUFA12Q9UI09 145 aa9.92□□□□□ -0.82
MSH5-202ENST00000375740 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
MSH5-202ENST00000375740 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
MSH5-202ENST00000375740 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
MSH5-202ENST00000375740 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
MSH5-202ENST00000375740 HERVK_113P63121 156 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 MIAQ16674 131 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 C3orf22Q8N5N4 141 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 SPATA3Q8NHX4 192 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
MSH5-202ENST00000375740 OTOGQ6ZRI0 2925 aa9.88□□□□□ -0.83
MSH5-202ENST00000375740 TRGV4A0A0C4DH28 118 aa9.88□□□□□ -0.83
MSH5-202ENST00000375740 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
MSH5-202ENST00000375740 TIRAPP58753 221 aa9.87□□□□□ -0.83
MSH5-202ENST00000375740 COX6A2Q02221 97 aa9.87□□□□□ -0.83
MSH5-202ENST00000375740 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
MSH5-202ENST00000375740 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
MSH5-202ENST00000375740 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.87□□□□□ -0.83
MSH5-202ENST00000375740 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
MSH5-202ENST00000375740 FHL2Q14192 279 aa9.86□□□□□ -0.83
MSH5-202ENST00000375740 CYSTM1Q9H1C7 97 aa9.86□□□□□ -0.83
MSH5-202ENST00000375740 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
MSH5-202ENST00000375740 IGLV5-45A0A087WSX0 123 aa9.85□□□□□ -0.83
MSH5-202ENST00000375740 IMUPQ9GZP8 106 aa9.85□□□□□ -0.83
MSH5-202ENST00000375740 FN1P02751 2386 aaKnown RBP9.84□□□□□ -0.83
MSH5-202ENST00000375740 UQCRQO14949 82 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
MSH5-202ENST00000375740 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
MSH5-202ENST00000375740 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
MSH5-202ENST00000375740 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 DEFB130BP0DP73 79 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 DEFB130AP0DP74 79 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 C2CD3Q4AC94 2353 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 UBE2L6O14933 153 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
MSH5-202ENST00000375740 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
MSH5-202ENST00000375740 C2orf48Q96LS8 159 aa9.82□□□□□ -0.84
MSH5-202ENST00000375740 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
MSH5-202ENST00000375740 X6R8D5 127 aa9.81□□□□□ -0.84
MSH5-202ENST00000375740 ACYP1P07311 99 aa9.81□□□□□ -0.84
MSH5-202ENST00000375740 SMIM9A6NGZ8 99 aa9.8□□□□□ -0.84
MSH5-202ENST00000375740 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
MSH5-202ENST00000375740 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
MSH5-202ENST00000375740 NSD1Q96L73 2696 aaPredicted RBP9.8□□□□□ -0.84
MSH5-202ENST00000375740 COX7CP15954 63 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 COX7A2LO14548 114 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 IGLV5-39A0A0G2JS06 123 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 NDUFA1O15239 70 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms