RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
SLC44A1-202ENST00000374723 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.86
SLC44A1-202ENST00000374723 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.87
SLC44A1-202ENST00000374723 PTPRBP23467 1997 aa9.65□□□□□ -0.87
SLC44A1-202ENST00000374723 FSHBP01225 129 aa9.65□□□□□ -0.87
SLC44A1-202ENST00000374723 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
SLC44A1-202ENST00000374723 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
SLC44A1-202ENST00000374723 LINC01006Q8NI28 216 aa9.64□□□□□ -0.87
SLC44A1-202ENST00000374723 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
SLC44A1-202ENST00000374723 ESRGQ1W209 222 aa9.63□□□□□ -0.87
SLC44A1-202ENST00000374723 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
SLC44A1-202ENST00000374723 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
SLC44A1-202ENST00000374723 M0QXV9 152 aa9.63□□□□□ -0.87
SLC44A1-202ENST00000374723 TRBV30A0A0K0K1B3 111 aa9.62□□□□□ -0.87
SLC44A1-202ENST00000374723 C22orf34Q6ZV56 151 aa9.62□□□□□ -0.87
SLC44A1-202ENST00000374723 LINC00574Q9H8X3 128 aa9.62□□□□□ -0.87
SLC44A1-202ENST00000374723 LRRK2Q5S007 2527 aa9.62□□□□□ -0.87
SLC44A1-202ENST00000374723 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
SLC44A1-202ENST00000374723 A8MZ25 164 aa9.61□□□□□ -0.87
SLC44A1-202ENST00000374723 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
SLC44A1-202ENST00000374723 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
SLC44A1-202ENST00000374723 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
SLC44A1-202ENST00000374723 PLA2G2AP14555 144 aa9.6□□□□□ -0.87
SLC44A1-202ENST00000374723 TTC28Q96AY4 2481 aa9.6□□□□□ -0.87
SLC44A1-202ENST00000374723 PRM2P04554 102 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 REG3GQ6UW15 175 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 TSHBP01222 138 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 IGLV2-8P01709 118 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 TIMM17BO60830 172 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 C11orf71Q6IPW1 123 aa9.59□□□□□ -0.87
SLC44A1-202ENST00000374723 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
SLC44A1-202ENST00000374723 FSTL3O95633 263 aa9.58□□□□□ -0.88
SLC44A1-202ENST00000374723 MRGPRG-AS1Q2M3A8 158 aa9.58□□□□□ -0.88
SLC44A1-202ENST00000374723 CRIP1P50238 77 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 COL4A3Q01955 1670 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
SLC44A1-202ENST00000374723 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 CYSRT1A8MQ03 144 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 LST1O00453 97 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 EBI3Q14213 229 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 SMR3AQ99954 134 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 P0C879 139 aa9.56□□□□□ -0.88
SLC44A1-202ENST00000374723 LINC01556Q5JQF7 62 aa9.55□□□□□ -0.88
SLC44A1-202ENST00000374723 MRPS12O15235 138 aaKnown RBP9.55□□□□□ -0.88
SLC44A1-202ENST00000374723 TRBV7-6A0A0J9YX20 115 aa9.55□□□□□ -0.88
SLC44A1-202ENST00000374723 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
SLC44A1-202ENST00000374723 U3KQK5 164 aa9.55□□□□□ -0.88
SLC44A1-202ENST00000374723 MRPS36P82909 103 aaKnown RBP9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 Q8IZM0 81 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 C2CD3Q4AC94 2353 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 CELA1Q9UNI1 258 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 MBD6Q96DN6 1003 aa9.54□□□□□ -0.88
SLC44A1-202ENST00000374723 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
SLC44A1-202ENST00000374723 C11orf1Q9H5F2 150 aa9.53□□□□□ -0.88
SLC44A1-202ENST00000374723 SPINK1P00995 79 aa9.52□□□□□ -0.89
SLC44A1-202ENST00000374723 NRACQ8N912 160 aa9.52□□□□□ -0.89
SLC44A1-202ENST00000374723 Q6ZS46 218 aa9.52□□□□□ -0.89
SLC44A1-202ENST00000374723 BRI3O95415 125 aa9.51□□□□□ -0.89
SLC44A1-202ENST00000374723 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
SLC44A1-202ENST00000374723 NDUFA7O95182 113 aa9.5□□□□□ -0.89
SLC44A1-202ENST00000374723 C1orf134Q5TEV5 83 aa9.5□□□□□ -0.89
SLC44A1-202ENST00000374723 BRWD1-AS2P59051 145 aa9.5□□□□□ -0.89
SLC44A1-202ENST00000374723 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 KLLNB2CW77 178 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 PRR9Q5T870 116 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
SLC44A1-202ENST00000374723 LINC01547P58512 204 aaPredicted RBP9.48□□□□□ -0.89
SLC44A1-202ENST00000374723 Q9BRP9 147 aa9.48□□□□□ -0.89
SLC44A1-202ENST00000374723 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
SLC44A1-202ENST00000374723 EIF4EBP1Q13541 118 aaPredicted RBP9.47□□□□□ -0.89
SLC44A1-202ENST00000374723 PIEZO2Q9H5I5 2752 aa9.47□□□□□ -0.89
SLC44A1-202ENST00000374723 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.89
SLC44A1-202ENST00000374723 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
SLC44A1-202ENST00000374723 Q6Q795 121 aa9.46□□□□□ -0.9
SLC44A1-202ENST00000374723 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
SLC44A1-202ENST00000374723 Q6ZTC4 211 aa9.45□□□□□ -0.9
SLC44A1-202ENST00000374723 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
SLC44A1-202ENST00000374723 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
SLC44A1-202ENST00000374723 Q8N814 137 aa9.44□□□□□ -0.9
SLC44A1-202ENST00000374723 COX7CP15954 63 aa9.44□□□□□ -0.9
SLC44A1-202ENST00000374723 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
SLC44A1-202ENST00000374723 Q6JHZ5 121 aa9.44□□□□□ -0.9
SLC44A1-202ENST00000374723 Q8N6K4 173 aa9.44□□□□□ -0.9
SLC44A1-202ENST00000374723 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
SLC44A1-202ENST00000374723 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
SLC44A1-202ENST00000374723 Q6ZPA2 131 aa9.43□□□□□ -0.9
SLC44A1-202ENST00000374723 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
SLC44A1-202ENST00000374723 COX6A2Q02221 97 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms